PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10356.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 284aa MW: 30131.6 Da PI: 10.0085

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.7	4.1e-38	51	160	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg......... 88 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ s+ +s+sss+ OVA10356.1 51 TVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSavaL----SVRGSSSSSTsisasldqk 145 689*************************************************************999997774431....3333322222223344444 PP TCP 89 ..............k 89 k OVA10356.1 146 ptsqilsptpfllgK 160 555555544444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MSTTDGATNG VSNNGALMVM DHPQRQQPQQ GNNGTLMDSQ RQQTPGNGAL TVKKPPAKDR 60 HSKVDGRGRR IRMPIICAAR VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS 120 FSAVALSVRG SSSSSTSISA SLDQKPTSQI LSPTPFLLGK RLRTDDDADD HEKNDASAVS 180 TAAAAAASAM AGGFWAVPAR PDYGQVWSFS AAPEMVLPTP VMASQPFMSA RFGQQQQQQQ 240 QHQISEASGV RLGNYFPIAQ GHLNLLASLS GAPASSGRRD DEPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-56	TCP family protein