PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 175aa MW: 19973.5 Da PI: 8.7901 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52 | 2.3e-16 | 78 | 174 | 2 | 85 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +YneYA++vGFs+r++k+++s+ +g ++f+Cskeg+r+ ++++ + +rr+ ++ r+gC ak k e +++ +++ + eH OVA10252.1 78 YYNEYARTVGFSIRRAKNRRSNIDGALLFQRFCCSKEGHRRARRDNdgeepkrmkdgvlVKVRRRNVKSIRVGCSAKGKAYAEVSKTHSINSRRYEH 174 8****************************************999999***********989999999**********99999999999998888888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MDMCFMCRFK ELAVMENTGQ YDSLGANDVT FGDLPECGDS HAVEGLPSST ELNAPNEVTF 60 SKPFVGMEFD SLDKAYFYYN EYARTVGFSI RRAKNRRSNI DGALLFQRFC CSKEGHRRAR 120 RDNDGEEPKR MKDGVLVKVR RRNVKSIRVG CSAKGKAYAE VSKTHSINSR RYEHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 1e-12 | FAR1 family protein |