PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10245.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YA
Protein Properties Length: 339aa    MW: 37886.2 Da    PI: 7.5
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.32.2e-32179235158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e ekkl ++ rkpylheSRh+hA+rR+Rg+gGrF
  OVA10245.1 179 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IRVRKPYLHESRHQHAMRRARGCGGRF 235
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDNMHKEIGN IHSKSENEDL QEINAHSIPS STVSQPWWRG VANSASPEVI LVESTSKSTQ  60
AQLPDVGERT RTQESQADDG LDEVVGVSKE VQTTVPLQSG SDGHEQQHVS SAVPPTGGEC  120
LLQQNQLDLV GHSVVCTSYP YSEPYSRGVM TTYGTQALVH PHLLGMHQTR MTLPLEMVEE  180
PVYVNAKQYH GILRRRQSRA KAELEKKLIR VRKPYLHESR HQHAMRRARG CGGRFLNTKK  240
LQNNENGAGF DPLPSNCTAN LDFSGAQKEM KGLQEQQMQE AHTSNDKAKD RNRYKHHQGF  300
RLSTFYPLPG ERGEEGDGSC QQWGSIPVNR APHRALTIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-53NF-YA family protein