PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10173.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 1890aa MW: 209401 Da PI: 6.622

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27	1e-08	790	832	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+ E e +++ + +G++ +k+Ia+ + ++t +c+++++k+ OVA10173.1 790 PWTPAEKEVFLEMLATFGKD-FKRIASFLD-HKTTADCIEFYYKH 832 8***************99.*****.**********97 PP
2	Myb_DNA-binding	24.6	6e-08	1010	1050	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++++a+k + ++ + +I+r++ +R++ qck ++ OVA10173.1 1010 DWTDEEKSIFIRAFKSYHKN-FMKISRCIR-TRSEDQCKIFFS 1050 7***************88.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1890 aa Download sequence
MPPEPLPWDR KDFFKEKKHD RLDSIGSVSR WRDSHQGSRE FSRWGPDDFR RPLGHGKQGG 60 YQLFPEESGY GCTPSRSSER MVDDESNFRP FTSRGEGKYS RNNREVRGSI SQKDWRGHLR 120 ETGDVSVNSS GRHHDLSAQR SVSDLITSHH SDIENSSCDQ PHFKDEHDKM GSFDGLGTGH 180 RYERDHSLGS ITWNRVTWNR SSSLSSRGSG FSHSSSSRSM RADSDESKPE LPPGGTTPVR 240 SPLRDAAGGV TSTMNEETCP RKKQRLGWGQ GLAKYEKQKV EGPDDNAKNP KTTQSIIPSS 300 SDRSPRVTGL SECSSPPTPS SFACSSSPVL EDKPHTKDAR NDNHTSNSSG SPSHGFQNFV 360 EGFSVNLEHL ELTPTSNLSC LLNDLLQPED ASSGDSNFVR STAMNKLLLL KTEFLKAVEK 420 TECEIDMFEN ELKLLKSEPD TGGPRPTASE SLQVKFELKP CEVVGAVSKV LQKPAPLQLV 480 SFDDLPMDKT ILCDDAMREG QTEIEDDIDS PGTATSKFVE PSLMEKADFS SHIENHGGYF 540 TGIEEVGSTS PEGKCSPSVD IKSAVEPCTG DVNLVNEMNA ISHVSSDLKT PSHTEINLSE 600 SILASNRDFA RSVSEIFTKL LPTDGPQIDR WEAVSVSCQQ NNLLIKEKLM ARKRFQRFKE 660 RVLTLKYRAL QHMWKEDMHL LSIRKYRAKS HKRFESSLKI LHNGHQKHRS SVRSRFTSPA 720 GNLTLVPTTN IVDFTSKLLS DSQIKLHRSS LKMPALILDG KERRFSRFVT SNGLVEDPCS 780 VEKERVMINP WTPAEKEVFL EMLATFGKDF KRIASFLDHK TTADCIEFYY KHHKSESFEK 840 IKKKLEHRKQ GRNIPTNTYL VTSGKKWNRE ANAVSLDVLG AASVIAAHTD DSVKTQQSSV 900 GRSFLGRHCD YKASSGDFAI VGKSNSSDMI GNDREAVAAD ALAGIYGALS SEAVSSCITS 960 SIDPMEGCQD WKFQKRNSLV DCPLTSDVMQ KFDCQEACSD ESCGELDSMD WTDEEKSIFI 1020 RAFKSYHKNF MKISRCIRTR SEDQCKIFFS KARKSLGLDF IQLGLGNEGA LLSDDNGGRS 1080 DTEDACVLEM ESAICSTQSC TKMDVDLPLS VANTNDIGSG RDSTTRIHTE RRKLEESNGL 1140 ETLDCEDSDQ RKEVPDDCWA AVKPELTFDG DDNLVKITER KVNVTPDMLQ FDDGMTEDAT 1200 LSYDLPVQET KTVKEQGINR AISSHDESVC AGRPSGPGRP KSDSAVELNA VQGVFAEKPK 1260 SESTEGQVFC KSGCECRQDV KDGVDIDSSR SSSCCNVPDS KTNRHILVNG TTVSPGFSLT 1320 PNYHGQISGE LVPLVQEAQV VSWQQKENYP SVSAKLSLRD SSTIHYQDHL GQSTQSSTLN 1380 FEDRQRQTSI SADAYQPYLM GRNSLNGVES SQILRGYPLK VLNKKELNGD AESIICENHP 1440 VVQNISKVIR DSQSNQFLLQ GLYHEKSNGL KAPRSLSELP LLAKGHEQTS SDHSRSHSRS 1500 SSDTEEHSRR FGDVKLFGKI LSHPSPVQTS PIPTPHKTDS KMETPQLSSG KSSDLKLING 1560 HGMDDGSLAA KLDTGNHSGL GEDYPMRSYG YWDGNRIQMG FSSLPDSAIL FSNYPAAYSD 1620 FSGTSSCGDL QPQPLQTVIK RKDRNLGCVS VYPTKDISSA NSSSRGLTDY HQVYRSYDGT 1680 KDVKRHDIFT ELQKRNGCEK MSGFQQQQQG RGAVMVGMNV KGGGGILVGG GVSDPVAAIK 1740 MHYATTTERY GGTAGSMMRE EESWRGGDIG SLAFVATPGK KGTGEPCLIY FTLLYKCPRK 1800 KEIFGGTEGS FARWVGWWGI CGRDQIPDSN DDDDDGYGTS QRQLLGPWVC FGKDQSSHKT 1860 VERMRSVGWE TSYPVNNAQH LHVYHLTKRE

Sequence ? help Back to Top

Protein Sequence Length: 1890 aa Download sequence

MPPEPLPWDR KDFFKEKKHD RLDSIGSVSR WRDSHQGSRE FSRWGPDDFR RPLGHGKQGG  60
YQLFPEESGY GCTPSRSSER MVDDESNFRP FTSRGEGKYS RNNREVRGSI SQKDWRGHLR  120
ETGDVSVNSS GRHHDLSAQR SVSDLITSHH SDIENSSCDQ PHFKDEHDKM GSFDGLGTGH  180
RYERDHSLGS ITWNRVTWNR SSSLSSRGSG FSHSSSSRSM RADSDESKPE LPPGGTTPVR  240
SPLRDAAGGV TSTMNEETCP RKKQRLGWGQ GLAKYEKQKV EGPDDNAKNP KTTQSIIPSS  300
SDRSPRVTGL SECSSPPTPS SFACSSSPVL EDKPHTKDAR NDNHTSNSSG SPSHGFQNFV  360
EGFSVNLEHL ELTPTSNLSC LLNDLLQPED ASSGDSNFVR STAMNKLLLL KTEFLKAVEK  420
TECEIDMFEN ELKLLKSEPD TGGPRPTASE SLQVKFELKP CEVVGAVSKV LQKPAPLQLV  480
SFDDLPMDKT ILCDDAMREG QTEIEDDIDS PGTATSKFVE PSLMEKADFS SHIENHGGYF  540
TGIEEVGSTS PEGKCSPSVD IKSAVEPCTG DVNLVNEMNA ISHVSSDLKT PSHTEINLSE  600
SILASNRDFA RSVSEIFTKL LPTDGPQIDR WEAVSVSCQQ NNLLIKEKLM ARKRFQRFKE  660
RVLTLKYRAL QHMWKEDMHL LSIRKYRAKS HKRFESSLKI LHNGHQKHRS SVRSRFTSPA  720
GNLTLVPTTN IVDFTSKLLS DSQIKLHRSS LKMPALILDG KERRFSRFVT SNGLVEDPCS  780
VEKERVMINP WTPAEKEVFL EMLATFGKDF KRIASFLDHK TTADCIEFYY KHHKSESFEK  840
IKKKLEHRKQ GRNIPTNTYL VTSGKKWNRE ANAVSLDVLG AASVIAAHTD DSVKTQQSSV  900
GRSFLGRHCD YKASSGDFAI VGKSNSSDMI GNDREAVAAD ALAGIYGALS SEAVSSCITS  960
SIDPMEGCQD WKFQKRNSLV DCPLTSDVMQ KFDCQEACSD ESCGELDSMD WTDEEKSIFI  1020
RAFKSYHKNF MKISRCIRTR SEDQCKIFFS KARKSLGLDF IQLGLGNEGA LLSDDNGGRS  1080
DTEDACVLEM ESAICSTQSC TKMDVDLPLS VANTNDIGSG RDSTTRIHTE RRKLEESNGL  1140
ETLDCEDSDQ RKEVPDDCWA AVKPELTFDG DDNLVKITER KVNVTPDMLQ FDDGMTEDAT  1200
LSYDLPVQET KTVKEQGINR AISSHDESVC AGRPSGPGRP KSDSAVELNA VQGVFAEKPK  1260
SESTEGQVFC KSGCECRQDV KDGVDIDSSR SSSCCNVPDS KTNRHILVNG TTVSPGFSLT  1320
PNYHGQISGE LVPLVQEAQV VSWQQKENYP SVSAKLSLRD SSTIHYQDHL GQSTQSSTLN  1380
FEDRQRQTSI SADAYQPYLM GRNSLNGVES SQILRGYPLK VLNKKELNGD AESIICENHP  1440
VVQNISKVIR DSQSNQFLLQ GLYHEKSNGL KAPRSLSELP LLAKGHEQTS SDHSRSHSRS  1500
SSDTEEHSRR FGDVKLFGKI LSHPSPVQTS PIPTPHKTDS KMETPQLSSG KSSDLKLING  1560
HGMDDGSLAA KLDTGNHSGL GEDYPMRSYG YWDGNRIQMG FSSLPDSAIL FSNYPAAYSD  1620
FSGTSSCGDL QPQPLQTVIK RKDRNLGCVS VYPTKDISSA NSSSRGLTDY HQVYRSYDGT  1680
KDVKRHDIFT ELQKRNGCEK MSGFQQQQQG RGAVMVGMNV KGGGGILVGG GVSDPVAAIK  1740
MHYATTTERY GGTAGSMMRE EESWRGGDIG SLAFVATPGK KGTGEPCLIY FTLLYKCPRK  1800
KEIFGGTEGS FARWVGWWGI CGRDQIPDSN DDDDDGYGTS QRQLLGPWVC FGKDQSSHKT  1860
VERMRSVGWE TSYPVNNAQH LHVYHLTKRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-147	MYB family protein