PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10164.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 582aa MW: 64105.4 Da PI: 8.7189

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	73	95	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OVA10164.1 73 FICEICNKGFQRDQNLQLHRRGH 95 89*******************88 PP
2	zf-C2H2	12.5	0.00044	149	171	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OVA10164.1 149 WKCEKCSKKYAVQSDWKAHSKTC 171 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MQMMSGDTFS IPSATRGFAQ ELVVLPNSNP NSTTTATTNQ VAVKRKRNLP GTPDPDAEVI 60 ALSPKSLMAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRTSKEIR KRVYICPEKT 120 CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC 180 GTLFSRKDSF ITHRAFCDAL AEESARLTSL PTNLNFRTDS ISDTIGNPQR PNLPFGFDSR 240 GGQDAARIPP QFCSVFRPAD FSAGDADVDR HKPRLPLWLD QANSQLNSID VSGNSNAFLA 300 SNPTGLPELM QMASTNLFGT SSPMVDCGGC INQSQWAEKS SLTSTSSPSG LKEEGGNKEQ 360 MVESLASLYS NQNQQQQQNS SSVVNMSATA LLQKAASMGA TRSNPNFIVG FGGVMSSTSS 420 SDNTSFNTHH QSSQNRNEFH QLFMRQQQPK QQQQQSHHDH QTFNNLMMNS ISTMATSTVN 480 AVHDSHGMLG SLNLSSLTNT ANNLDRLMIP TNGGKQGQSV PLKLHNLSGS TDQVDEHSLT 540 RDFLGVGAGD DDSDHRPFLQ HELAKFASMG SALDFSHYSA NR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MQMMSGDTFS IPSATRGFAQ ELVVLPNSNP NSTTTATTNQ VAVKRKRNLP GTPDPDAEVI  60
ALSPKSLMAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRTSKEIR KRVYICPEKT  120
CVHHDPSRAL GDLTGIKKHF SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC  180
GTLFSRKDSF ITHRAFCDAL AEESARLTSL PTNLNFRTDS ISDTIGNPQR PNLPFGFDSR  240
GGQDAARIPP QFCSVFRPAD FSAGDADVDR HKPRLPLWLD QANSQLNSID VSGNSNAFLA  300
SNPTGLPELM QMASTNLFGT SSPMVDCGGC INQSQWAEKS SLTSTSSPSG LKEEGGNKEQ  360
MVESLASLYS NQNQQQQQNS SSVVNMSATA LLQKAASMGA TRSNPNFIVG FGGVMSSTSS  420
SDNTSFNTHH QSSQNRNEFH QLFMRQQQPK QQQQQSHHDH QTFNNLMMNS ISTMATSTVN  480
AVHDSHGMLG SLNLSSLTNT ANNLDRLMIP TNGGKQGQSV PLKLHNLSGS TDQVDEHSLT  540
RDFLGVGAGD DDSDHRPFLQ HELAKFASMG SALDFSHYSA NR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-105	C2H2 family protein