PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10127.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 697aa MW: 76582.3 Da PI: 7.1059

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74	1.7e-23	122	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF +++++ l OVA10127.1 122 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFL--RTENGDL 216 89**************************996555555..8999*****************************************..4588999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ OVA10127.1 217 CVGIRRA 223 **997 PP
2	Auxin_resp	117.6	1e-38	291	374	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk+++v++al+++++ GmRfkmafetedss++++ +Gt+++v+ +dp++Wp+S+Wr+L+ OVA10127.1 291 AATLAANGQPFEVVYYPRASTPEFCVKASSVRAALRNQWCSGMRFKMAFETEDSSRISWfMGTISSVQVADPMHWPGSPWRLLQ 374 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MIKFVDSVKE QRKEMEKCLD SQLWHACAGG MVQMPQVNSK VFYFPQGQAE HANGNVDFGS 60 SLRIPALILC RVAGVKFMAD PETDEVYAKL RLIPLRNNEP DYDDDGVHGN NGSEVQEKPA 120 SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVLAKDVHGE VWKFRHIYRG 180 TPRRHLLTTG WSTFVNQKKL IAGDSIVFLR TENGDLCVGI RRAKRGIGGG PESSSGWNPA 240 SGNCVSPYGG YSVFLREDEN KLMRNANGGN SNSCGGFRGK GKVRPESVIE AATLAANGQP 300 FEVVYYPRAS TPEFCVKASS VRAALRNQWC SGMRFKMAFE TEDSSRISWF MGTISSVQVA 360 DPMHWPGSPW RLLQVTWDEP DLLQNVKRVS PWLVELVSGM PSIHLSSPFS PPRKKLRIPQ 420 HPDFPFDGQL PMPSIPSNPF GPSSPSCCLS DNTPAGIQGA RHAQFGISLS DLHLNKLQSG 480 LFVAGFQRPH HAAPPSRISS GIIMSNPICK ENVSCLLTMG NSTQSSKKSN DGKTAQFVLF 540 GQPILTEEQI SLSCSGELTG NSSSDGNLEK TVNFSDSIAS AVHQHGPTEN SSYEGFPWYK 600 DRQLTELGLE TGHCKVFMES EDVGRTLDLS VLGSYEDLYG RLANMFGIER SEMLTHVLYR 660 DATGTVKHTG DEPFSEFTKT ARRLTILMDS GSDNIGR

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MIKFVDSVKE QRKEMEKCLD SQLWHACAGG MVQMPQVNSK VFYFPQGQAE HANGNVDFGS  60
SLRIPALILC RVAGVKFMAD PETDEVYAKL RLIPLRNNEP DYDDDGVHGN NGSEVQEKPA  120
SFAKTLTQSD ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVLAKDVHGE VWKFRHIYRG  180
TPRRHLLTTG WSTFVNQKKL IAGDSIVFLR TENGDLCVGI RRAKRGIGGG PESSSGWNPA  240
SGNCVSPYGG YSVFLREDEN KLMRNANGGN SNSCGGFRGK GKVRPESVIE AATLAANGQP  300
FEVVYYPRAS TPEFCVKASS VRAALRNQWC SGMRFKMAFE TEDSSRISWF MGTISSVQVA  360
DPMHWPGSPW RLLQVTWDEP DLLQNVKRVS PWLVELVSGM PSIHLSSPFS PPRKKLRIPQ  420
HPDFPFDGQL PMPSIPSNPF GPSSPSCCLS DNTPAGIQGA RHAQFGISLS DLHLNKLQSG  480
LFVAGFQRPH HAAPPSRISS GIIMSNPICK ENVSCLLTMG NSTQSSKKSN DGKTAQFVLF  540
GQPILTEEQI SLSCSGELTG NSSSDGNLEK TVNFSDSIAS AVHQHGPTEN SSYEGFPWYK  600
DRQLTELGLE TGHCKVFMES EDVGRTLDLS VLGSYEDLYG RLANMFGIER SEMLTHVLYR  660
DATGTVKHTG DEPFSEFTKT ARRLTILMDS GSDNIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein