PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA09913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | LBD | ||||||||
Protein Properties | Length: 204aa MW: 22477.7 Da PI: 5.1705 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 134 | 5.7e-42 | 32 | 131 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++Cvlapyfp ++p kf +h++FGasn++k+l++lpe++r da+ss+vyeA+ r+rdPvyG++g+i +l++q+++l+a+la++++ OVA09913.1 32 PCAACKILRRRCIEKCVLAPYFPPNEPLKFTTAHRVFGASNIIKMLQELPESQRADAVSSMVYEANSRIRDPVYGCAGTICQLHKQVSELQAQLAKAQA 130 7***********************************************************************************************998 PP DUF260 100 e 100 e OVA09913.1 131 E 131 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MVSSDTTTTT STTTITTSST LSPPPPPVVV SPCAACKILR RRCIEKCVLA PYFPPNEPLK 60 FTTAHRVFGA SNIIKMLQEL PESQRADAVS SMVYEANSRI RDPVYGCAGT ICQLHKQVSE 120 LQAQLAKAQA EILNMQCQQS NLVALICMEM THSQQPISPL STTTSQQVLV DDYFMNNNTP 180 SFQTNDVFFD DANIGSVVWE PLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 1e-60 | LBD family protein |