PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09665.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family ARF
Protein Properties Length: 870aa    MW: 96563.2 Da    PI: 7.1579
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.11.7e-23164265199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++ +++a+e+      g +++ +++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+
  OVA09665.1 164 FCKTLTASDTSTHGGFSVLRRHADEClppldmGRQPP-TQELIAKDLHGTEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 259
                 99*****************************755544.469************************************************..449999** PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 v+v+r+
  OVA09665.1 260 VGVRRA 265
                 ***996 PP
2Auxin_resp118.45.8e-39290372183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st+++F+v+Y+Pr+s++eF+v+++++++++k++ s+GmRfkm+fe+e+++e+r++Gt+vg+ d+dp rWp SkWrsLk
  OVA09665.1 290 AWHAVSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNHSIGMRFKMRFEGEEAPEQRFTGTIVGIGDADPNRWPSSKWRSLK 372
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 870 aa     Download sequence    
MASSDISIKV NCSNSRGESL SSSCSERNEG GMAKNGVPET PRSYSSFPAT GKGSEEALYT  60
ELWHACAGPL VTVPRENERV FYFPQGHIEQ VEASTNQVAD QQMPVCDLPW KILCRVINVE  120
LKAEPDTDEV FAQVTLLPEA NQDENAVEKE PMPPPRPRPH VHSFCKTLTA SDTSTHGGFS  180
VLRRHADECL PPLDMGRQPP TQELIAKDLH GTEWRFRHIF RGQPRRHLLQ SGWSVFVSSK  240
RLVAGDAFIF LRGENGELRV GVRRAMRQQS NVPSSVISSH SMHLGVLATA WHAVSTGTMF  300
TVYYKPRTSP AEFIVPFDQY MESVKNNHSI GMRFKMRFEG EEAPEQRFTG TIVGIGDADP  360
NRWPSSKWRS LKVRWDETSS VPRPERVSPW KIEPAVTPTL NTTPMSRPKR PRSNMVPSSP  420
DSSVLTREGS SKVAIEPSPV SGFSRVLQGQ ETSTLRGTFA ENESDTAQKP VVWPRGSTDD  480
EKTDMVSRER IFGSENWGIP LGRQEPTYSD LLSGFRSSND SPRGFSSPLV DHTLDNMSPS  540
KKHIQDQDGK FHLLAGSWSM MPSSPSVNML DSSMKVPPQA GEISYQKPGT VRYGGLGGYP  600
VLPSLRVEQH PGNWLTPLLP PSHSGTLHHP RGVRPQSSLL QQRETIKSKG DGNCKIFGIP  660
LNSNPVVSEP TMPHTNMTHK PEANVQPTPH NPHSLESDQQ SEQSKGPRSA DAAPLGNEQE  720
KSVQACQQRS GDVQSRVQGG STRSCTKVHK QGIALGRSVD LTKFNGYDEL ITELDQMFEF  780
NGELRAPNKS WLVVYTDNEG DMMLVGDDPW KEFCSMVRKI FIYTREEVQR MNKGTLNSKV  840
DESPSLAEER ASPKESKSQQ FPSAASSENC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein