PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09574.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 396aa MW: 43763.1 Da PI: 7.7472

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.8	1.2e-41	94	170	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls++++yhrrhkvCevhsk+p+v+v g+eqrfCqqCsrfh l efDe krsCr+rL++hn+rrrk+q+ OVA09574.1 94 CLVDGCNADLSKCRDYHRRHKVCEVHSKTPKVMVGGQEQRFCQQCSRFHLLVEFDEVKRSCRKRLDGHNRRRRKPQP 170 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDWDLKATAW DFAELERESE HNITPLVGSS SGGQQNTRGD CSVDLKLGRL GDFGDVSVNK 60 WEDPRVSTMV SSSPLATMKR ARASSGNGVQ TVSCLVDGCN ADLSKCRDYH RRHKVCEVHS 120 KTPKVMVGGQ EQRFCQQCSR FHLLVEFDEV KRSCRKRLDG HNRRRRKPQP ESLSMNSGSL 180 FSYHQGTRLL PFANPQVFPS TTVVSPTWRG VVKTEEDTIV NSHHLSLHYG DRQNPFPGSF 240 SRSHKGGKQF PFLQVNELGS RMVPEVSVSQ PLIHNVASSE NIGTGRKMFS DGLTRVLDSD 300 CALSLLSSPP TQRSGISLSH VVQPDSIPMS QPLVPDLQYN NGLGRYQSQG MDGETMGSVL 360 VSDATDAEIN CQGIFHMGHN GSSQNGMPQT LPFCWE

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDWDLKATAW DFAELERESE HNITPLVGSS SGGQQNTRGD CSVDLKLGRL GDFGDVSVNK  60
WEDPRVSTMV SSSPLATMKR ARASSGNGVQ TVSCLVDGCN ADLSKCRDYH RRHKVCEVHS  120
KTPKVMVGGQ EQRFCQQCSR FHLLVEFDEV KRSCRKRLDG HNRRRRKPQP ESLSMNSGSL  180
FSYHQGTRLL PFANPQVFPS TTVVSPTWRG VVKTEEDTIV NSHHLSLHYG DRQNPFPGSF  240
SRSHKGGKQF PFLQVNELGS RMVPEVSVSQ PLIHNVASSE NIGTGRKMFS DGLTRVLDSD  300
CALSLLSSPP TQRSGISLSH VVQPDSIPMS QPLVPDLQYN NGLGRYQSQG MDGETMGSVL  360
VSDATDAEIN CQGIFHMGHN GSSQNGMPQT LPFCWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	168	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-63	SBP family protein