PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09570.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27921.6 Da PI: 9.0947

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s OVA09570.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	93.1	4.8e-31	81	175	6	100
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++s+ e+ + s++qe+ kLk+++e Lqr+qR+llGedL++Ls keL++Le+qL+ slk+iRs++++++l+q+ +lq++e++l+e+nk++r++lee OVA09570.1 81 NVSARESLEHSSHQEYLKLKARVEALQRSQRNLLGEDLGPLSGKELESLERQLDMSLKQIRSTRTQYMLDQLTDLQRREQMLSEANKSMRRRLEE 175 4446677778999******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMFKTLERY QKCNYGQPET NVSARESLEH SSHQEYLKLK ARVEALQRSQ RNLLGEDLGP 120 LSGKELESLE RQLDMSLKQI RSTRTQYMLD QLTDLQRREQ MLSEANKSMR RRLEEGTQAS 180 QQQWEQSMHA AAGYGRQHAH QPGEGFFHPI ECEPTLQIGY QQDQITVAAS GPSMSSYMPG 240 WLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.1	1e-119	MIKC_MADS family protein