PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA09389.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 347aa    MW: 37813.4 Da    PI: 9.4172
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA09389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.68.9e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +          R+  ++k++w++
       OVA09389.1  5 KQKWTSEEEAALKAGVVKHGAGKWRTILKDPEfsgvlFLRSNVDLKDKWRN 55
                     79**********************************955**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGAPKQKWTS EEEAALKAGV VKHGAGKWRT ILKDPEFSGV LFLRSNVDLK DKWRNMSVTA  60
NGWGSRDRAR LALKRSQMIL KPDDNPLALS RVVQSDEEIV DAKPLAVSSA TLQIPGSNKS  120
ISSSRLDSLI IEAITSLKEP SGSNRTSIAM YIEDQYCAPP NFKRVLSAKL KLLTASGRLI  180
KVKRKYRIAP SPGFSEGRKS SGMLLLEGRQ RDSPIKEKVG IKVLTKSQID AELAKMRNMT  240
AQEAAAAAAR AVAEAEAAMA EAEQAAREAE AAEADAEAAE VFAQAALVTL KDRNTRLVRL  300
RCELQFWVKL ALQCTPTWVE CDCVHPLVDA ADGSCMNGAS QTDYGDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-86MYB_related family protein