PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09117.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

E2F/DP

Protein Properties

Length: 394aa MW: 43927.3 Da PI: 8.78

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.5	2.3e-23	28	93	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+++ + + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g OVA09117.1 28 RKQKSLGLLCTNFLGLYNRDDVESIGLDDAANRL---GV--ERRRIYDIVNVLESVGVLTRKAKNQYSWIG 93 79***************999********.....****************************98 PP
2	E2F_TDP	80.5	1.5e-25	164	244	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+f+kl+ + +++ v+l+e+ak L+ + ++++k+RR+YDi+NVL+++nliek ++k+++rw g OVA09117.1 164 RREKSLGLLTQNFVKLFLCNNSDLVSLDEAAKILLGDghnssQMRTKVRRLYDIANVLSSMNLIEKthhveSRKPAFRWLG 244 689*************************************************************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MDGSTEKIPI PTLSSLLYHD SKHHSYSRKQ KSLGLLCTNF LGLYNRDDVE SIGLDDAANR 60 LGVERRRIYD IVNVLESVGV LTRKAKNQYS WIGFSGIPKA LNDLKEEGLK ETSFNVFDAS 120 KNAKVSQGDE DESFSNPNNS TQQDASIPSI QALKSSSSAK IDNRREKSLG LLTQNFVKLF 180 LCNNSDLVSL DEAAKILLGD GHNSSQMRTK VRRLYDIANV LSSMNLIEKT HHVESRKPAF 240 RWLGINGKSQ NESSGCLDSK KRIFGTEITN VDVNVKRSKV LSMVDGKPYE NTNVHVKCED 300 LTNGMDGGSL QHEQQAKQTS KGVVFGPFSP AGLPKVGDTE KKNVKSVQDW ESLAASYRPK 360 YHNQALSDLF AHYMEAWKTW YTEVAGNQPL QQFS

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MDGSTEKIPI PTLSSLLYHD SKHHSYSRKQ KSLGLLCTNF LGLYNRDDVE SIGLDDAANR  60
LGVERRRIYD IVNVLESVGV LTRKAKNQYS WIGFSGIPKA LNDLKEEGLK ETSFNVFDAS  120
KNAKVSQGDE DESFSNPNNS TQQDASIPSI QALKSSSSAK IDNRREKSLG LLTQNFVKLF  180
LCNNSDLVSL DEAAKILLGD GHNSSQMRTK VRRLYDIANV LSSMNLIEKT HHVESRKPAF  240
RWLGINGKSQ NESSGCLDSK KRIFGTEITN VDVNVKRSKV LSMVDGKPYE NTNVHVKCED  300
LTNGMDGGSL QHEQQAKQTS KGVVFGPFSP AGLPKVGDTE KKNVKSVQDW ESLAASYRPK  360
YHNQALSDLF AHYMEAWKTW YTEVAGNQPL QQFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-132	E2F/DP family protein