PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08966.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 461aa MW: 49708.3 Da PI: 6.2416

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ + + g+ R++k+c++rw +yl OVA08966.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPIKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l OVA08966.1 67 RGTFSLHEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNHWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MGRAPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PIKAGLQRCG KSCRLRWTNY 60 LRPDIKRGTF SLHEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNHWNT HLKKRLAKMG 120 IDPVTHKPKS DALTSVDGQP RDSANISHMA QWESARLEAE ARLARDSKLK STSSLPSPPP 180 PPQQQPPAPP AGGTTSPPPP PPLQQQPPAS PVRATTSASS LSSSARLLNK IATQAATRAL 240 CQQRALHGSS ARATASAASS SLSSAQLLNK MATQPAAKAL CLDILRAWQG IKSESTISGS 300 IVGPGSNHGV ESPTSTLSFS ENSMSIQCVG LGENSTAGTE LVENSSNFGG GIPREDGSDD 360 EVWKDYEKCL DDVAFALDNQ WEFELLKIGD GQEPVLNFID GFTDLLLGHS DIDRDQSLDG 420 DGGESSNADG NGGDDYEQNK NYWNSIFDLV NTSPISESPA F

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MGRAPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PIKAGLQRCG KSCRLRWTNY  60
LRPDIKRGTF SLHEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNHWNT HLKKRLAKMG  120
IDPVTHKPKS DALTSVDGQP RDSANISHMA QWESARLEAE ARLARDSKLK STSSLPSPPP  180
PPQQQPPAPP AGGTTSPPPP PPLQQQPPAS PVRATTSASS LSSSARLLNK IATQAATRAL  240
CQQRALHGSS ARATASAASS SLSSAQLLNK MATQPAAKAL CLDILRAWQG IKSESTISGS  300
IVGPGSNHGV ESPTSTLSFS ENSMSIQCVG LGENSTAGTE LVENSSNFGG GIPREDGSDD  360
EVWKDYEKCL DDVAFALDNQ WEFELLKIGD GQEPVLNFID GFTDLLLGHS DIDRDQSLDG  420
DGGESSNADG NGGDDYEQNK NYWNSIFDLV NTSPISESPA F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.2	4e-93	MYB family protein