PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08906.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YA
Protein Properties Length: 334aa    MW: 36427.4 Da    PI: 8.892
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.34.5e-32180236158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rakle+++kl +k rkpylheSRh hAl+R+RgsgGrF
  OVA08906.1 180 NEPMYVNAKQYRAILRRRQSRAKLEAQNKL-IKDRKPYLHESRHLHALKRARGSGGRF 236
                 59****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MQDISKKDSD QSSTYSISHG AVSCPIWWTS AGSQIPQSCL SKSVSLNMDS SHQDCRSVKQ  60
LGFQLQDQDS SSTQSTGQSH HEMSNMRGSN PNGQSISVQS EDVETYAKQA DGHMKSVLSL  120
GTPEFVQVDY TQSVARLPYP YVDPYFGGLL ASYGPQAIIH PQVMGMTTAR VPLPLDLAEN  180
EPMYVNAKQY RAILRRRQSR AKLEAQNKLI KDRKPYLHES RHLHALKRAR GSGGRFLNTK  240
KLEGSKQNPA SNGHNTSNSA LLQLGGNLSE SEFSNTGGAS TTSCSDVTTS SNSDNIFRQQ  300
DLRFSGYPHL GGTVQDGGGG IMCNGSRHRV PVTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.15e-48NF-YA family protein