PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08838.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 518aa    MW: 58292 Da    PI: 6.1995
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3473.1e-1061505082374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +lLlecA a+s ++l  a+++  +l ++as +g ++ +R++ayf+ A+a+r+++s+ ++++ l          ++  +a+++f++ sP++kf+h+t N
  OVA08838.1 150 LTLLLECAVAISVDNLGDAHKVSLELIQMASAYGpSSAERVVAYFAMAMASRVMNSWLGICAPLINH-------KSIHSAFQVFNNNSPFIKFAHFTSN 241
                 579*******************************99************************9755443.......3456899****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpeg...ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 qaIlea+++++rvHiiD+di+qGlQWpaL++ La+R +g   pp +R+Tg+g     s e l etg++L++fA++lg++fef++ +ak++ +++l++ +
  OVA08838.1 242 QAILEAFHQSDRVHIIDLDIMQGLQWPALFHILATRFNGhdrPPFVRMTGFGT----SMEILMETGKQLSNFAKRLGLSFEFHP-IAKKFGEIDLSMVQ 335
                 ************************************9554559**********....***************************.7************* PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 +++gE++aV++    h+l+d +++  +    ++kl+++lsP+v+++veq++ h++ sFl+rf+ +l+yys++fdsl a+l  ++  r+ vE+ ll++ei
  OVA08838.1 336 IRRGETVAVHWLQ--HSLYDATGPDWN----TMKLLQQLSPRVITLVEQDIIHGGLSFLDRFVGSLHYYSTVFDSLGASLWCDEASRHHVEHCLLHKEI 428
                 ************9..99*999999999....******************************************************************** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  n++a  g +r   +e++++Wr+ l++  F +vp+s +a++qa+l+l++++ ++gyr+ +++gsl lgWk+ +L+++SaW+
  OVA08838.1 429 NNILAIGGPAR-SGEEKFNRWRSELGRHCFVQVPMSGNAMAQAQLILNMCPpGHGYRLVQSEGSLRLGWKETSLYTASAWT 508
                 *********95.55678***************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MMKEEFELVH GALDPIQTHE QWDCNIGFSA DIHQTSVSTS SLVTPVIDNR YSNQLNERFE  60
LSEWIENAVK QLPEGSLETS NETLRTKTLP STSEENFVVT NISDFQPQKS LEEIHWNGEL  120
GQKTNNFNEI NGGSSTREMN RSDLHGLDLL TLLLECAVAI SVDNLGDAHK VSLELIQMAS  180
AYGPSSAERV VAYFAMAMAS RVMNSWLGIC APLINHKSIH SAFQVFNNNS PFIKFAHFTS  240
NQAILEAFHQ SDRVHIIDLD IMQGLQWPAL FHILATRFNG HDRPPFVRMT GFGTSMEILM  300
ETGKQLSNFA KRLGLSFEFH PIAKKFGEID LSMVQIRRGE TVAVHWLQHS LYDATGPDWN  360
TMKLLQQLSP RVITLVEQDI IHGGLSFLDR FVGSLHYYST VFDSLGASLW CDEASRHHVE  420
HCLLHKEINN ILAIGGPARS GEEKFNRWRS ELGRHCFVQV PMSGNAMAQA QLILNMCPPG  480
HGYRLVQSEG SLRLGWKETS LYTASAWTSL NCSSMHYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-137GRAS family protein