PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08558.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 839aa    MW: 91662.7 Da    PI: 6.2111
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-181977357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  OVA08558.1 19 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 77
                5679*****************************************************97 PP
2START173.11.7e-541633712205
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  ++a  v+e+l+d++ W ++++++++l+v+ +   g+++l +++l
  OVA08558.1 163 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPA-RVAEVLKDRPSWFRDCRAVDVLNVLPTPngGTIELLYMQL 260
                 789*******************************************************.9999999999***************87557********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l+p Rdf+ +Ry+  l++g++v++++S++s+q  p+    +++vRae+lpSg+l++p+++g+s +++v+h+dl+  +++++lr+l++s+++ ++
  OVA08558.1 261 YAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLSSTQGGPSmptVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSTVLAQ 359
                 ***************************************9989889***************************************************** PP

                 HHHHHHTXXXXX CS
       START 194 ktwvatlqrqce 205
                 kt++a+l+++++
  OVA08558.1 360 KTTMAALRQLRQ 371
                 ********9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MMAVTTSCKD GKGGMDNGKY VRYTPEQVEA LERLYHECPK PSSIRRQQLI RECPILSNIE  60
PKQIKVWFQN RRCREKQRKE ASRLQAVNRK LTAMNKLLME ENDRLQKQVS QLVYENGYFR  120
QQTQNTTLAT TDTSCESVVT SGQHHLTPPH PPRDASPAGL LSIAEETLTE FLSKATGTAV  180
EWVQMPGMKP GPDSIGIVAI SHGCTGVAAR ACGLVGLEPA RVAEVLKDRP SWFRDCRAVD  240
VLNVLPTPNG GTIELLYMQL YAPTTLAPAR DFWLLRYTSV LEDGSLVVCE RSLSSTQGGP  300
SMPTVQHFVR AEMLPSGYLV RPCEGGGSII HIVDHMDLEP CSVPEVLRPL YESSTVLAQK  360
TTMAALRQLR QIAQEVSQST VTGWGRRPAA LRALTQRLSR GFNEALNGFT DEGWSSMGSD  420
GIDDVTILVN SNPGKLMGAN HAFVNGFPAV TNAVLCAKAS MLLQNVPAAV LLRFLREHRS  480
EWADSSIDAY SAAAVKAGPF NLPGARFGGF GGQVILPLAH TVEHEESLEV IKLENVGCQE  540
DSIMSKDLFL LQLCSGLDEN AVGTCAELIF APIDSTFADD APLLPSGFRI IPLDSGLDAS  600
SPNRTLDLAS ALEIGPAGNR ASGDYSGNGG GMRSVMTIAF QFAFESHLQE NVASMARQYV  660
RSIVSSVQRV ALALSPSNLS PHSGLRPPPG TPEAQTLAHW ICNSYRRYLG VELLKSNSEA  720
SESILKTLWH HADAIMCCSL KALPVFNFAN QAGLDMLETT LVALQDITLE KIFDDHGRKT  780
LCAEFPQIMQ QGFACLQGGI CLSSMGRPVS YERAVAWKVL DEEDNSHCIC FMFVNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein