PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA08505.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 273aa    MW: 30112.3 Da    PI: 6.7599
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA08505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding513.4e-161462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+++v ++G+g +W + +++ g++R++k+c++rw++yl
       OVA08505.1 14 RGPWSPEEDTALKNYVDRYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDTALKNYVD RYGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPDIKHGA SRLQGRTDND VKNYWNTKLK KKFLAGKFTS NNTTNDTQVH LSSSSLQPKS  120
KVENYGVLNC FDQNSSTMGL PIQVVYSQEF DSQRLVSDPT QFPLPSLMEA TEFSTSTSNN  180
SYSSTLVSST SQEVSGLPVQ VTSSLGFDDN NYILWSGNGS VEDDGFLMDF GLGSSYDLLH  240
DFGFQDKTNE TASNSANPIN ANFMANTPST VTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.15e-55MYB family protein