PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08218.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 626aa MW: 70335.2 Da PI: 6.9545

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	464	510	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq OVA08218.1 464 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 510 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MWVRDFRGRF VFVGFLVLGM LKMKTETETD CGFWNDEDKA MIVAVLGSRA FDYLTTSSVS 60 SEGLLTAVGR DENLQNKLSE LVESPNSSNF SWNYAIFWQI SRSKSGDLVL GWGDGYCREP 120 KDGEESEVNP LLSLRLEYES QQKMRKKVLQ KLHSFFGGSD EDNYALGLDR VTDTEMFFLA 180 SMYFSFPTGE GAPGKALHSG KHIWLSDSLK LPSDYCVRSF LSRSAGIQTT VLIPTDSGVV 240 ELGSVRSVPE NSEILQTIRC IFSTNSSAIR VKPITVVPMM NEKKDENGPL SSFGFRGRQD 300 EYPKIFGQDL NLGRSQINDK LIVEKVEERP WEVYPNGNRL PFPNNRKGFR AMNWPQMRGV 360 KPGTTTEGYG SPVAVNNQQK IGNSILVMED PRLNQYQSQN KQPQKHIDFS AGATSRGTLI 420 TRPVELEPSD VDVSYKDDQS GPADERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF 480 YALRAVVPNI SKMDKASLLG DAITYITELQ NKLKDMESEK EKLGNPSKDV ANSEANSAAE 540 NRNRTPDIDI QAVHDDFVVR VSCPLDTHPV SKVIQVFKDS QISVLESKFS TGNDTVFHTF 600 VVKSQGSEQL TKEKLMAAFS RDGSTL

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MWVRDFRGRF VFVGFLVLGM LKMKTETETD CGFWNDEDKA MIVAVLGSRA FDYLTTSSVS  60
SEGLLTAVGR DENLQNKLSE LVESPNSSNF SWNYAIFWQI SRSKSGDLVL GWGDGYCREP  120
KDGEESEVNP LLSLRLEYES QQKMRKKVLQ KLHSFFGGSD EDNYALGLDR VTDTEMFFLA  180
SMYFSFPTGE GAPGKALHSG KHIWLSDSLK LPSDYCVRSF LSRSAGIQTT VLIPTDSGVV  240
ELGSVRSVPE NSEILQTIRC IFSTNSSAIR VKPITVVPMM NEKKDENGPL SSFGFRGRQD  300
EYPKIFGQDL NLGRSQINDK LIVEKVEERP WEVYPNGNRL PFPNNRKGFR AMNWPQMRGV  360
KPGTTTEGYG SPVAVNNQQK IGNSILVMED PRLNQYQSQN KQPQKHIDFS AGATSRGTLI  420
TRPVELEPSD VDVSYKDDQS GPADERRPRK RGRKPANGRE EPLNHVEAER QRREKLNQRF  480
YALRAVVPNI SKMDKASLLG DAITYITELQ NKLKDMESEK EKLGNPSKDV ANSEANSAAE  540
NRNRTPDIDI QAVHDDFVVR VSCPLDTHPV SKVIQVFKDS QISVLESKFS TGNDTVFHTF  600
VVKSQGSEQL TKEKLMAAFS RDGSTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	446	454	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein