PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA08176.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HSF

Protein Properties

Length: 372aa MW: 42065.3 Da PI: 4.8895

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA08176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.3	1.4e-34	63	154	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed+e++ ++sws+ nsf+v+d+++f++ +Lpk+Fkhsnf+SF+RQLn+YgF+kv++e+ weF++++F g+k+ll++ik OVA08176.1 63 FLTKTFEMVEDPETNPVVSWSQGRNSFIVWDSHKFSTCLLPKFFKHSNFSSFIRQLNTYGFRKVDSEK---------WEFANEWFLGGQKHLLKNIK 150 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ OVA08176.1 151 RRRQ 154 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEGLTVKQEE VTVVVVGDGG GGGGGGGASR SSLSSSPTSS SSSSLILSPQ PMEGLHDMGP 60 PPFLTKTFEM VEDPETNPVV SWSQGRNSFI VWDSHKFSTC LLPKFFKHSN FSSFIRQLNT 120 YGFRKVDSEK WEFANEWFLG GQKHLLKNIK RRRQISKNTQ QGGIDGCVEL GQFGLEGEID 180 KLRKEKSFLT VEILNLREKQ KNSLDQLISI QERLQGTERK QQLTMSFLAR AFKSPTFIQH 240 LIYLSEKKRD LVGGIGKKRR LLPSKSTENF QEELISAAMG AIDYEPSRPL QEQKTDSVSI 300 NKDSSMGSID DKMWEELLNE DFITGNQEED MEENDQLEIN VEMEDFWGGD VQDMVEQMGW 360 GILDQRAEER HH

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEGLTVKQEE VTVVVVGDGG GGGGGGGASR SSLSSSPTSS SSSSLILSPQ PMEGLHDMGP  60
PPFLTKTFEM VEDPETNPVV SWSQGRNSFI VWDSHKFSTC LLPKFFKHSN FSSFIRQLNT  120
YGFRKVDSEK WEFANEWFLG GQKHLLKNIK RRRQISKNTQ QGGIDGCVEL GQFGLEGEID  180
KLRKEKSFLT VEILNLREKQ KNSLDQLISI QERLQGTERK QQLTMSFLAR AFKSPTFIQH  240
LIYLSEKKRD LVGGIGKKRR LLPSKSTENF QEELISAAMG AIDYEPSRPL QEQKTDSVSI  300
NKDSSMGSID DKMWEELLNE DFITGNQEED MEENDQLEIN VEMEDFWGGD VQDMVEQMGW  360
GILDQRAEER HH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	152	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	4e-98	HSF family protein