PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07954.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 544aa MW: 61831.3 Da PI: 7.4516

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.7	2.6e-20	64	154	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +Y+e++ +GFsvr+++s+++ r + t+ f+Cs+eg ++++ +e++ r++++ +tgCka++++ +++ +gkw v+k+ +HnH+l+ OVA07954.1 64 CYEEHGIATGFSVRRRSSYSTARGPQLTRVLFTCSCEGVHKKKCGLdDERKTRKSVSMKTGCKAMIRIARDRnTGKWFVNKFCDDHNHALV 154 5999********************************9988765537788889999********9999**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MVVEWEQCNY MGLVFLIEMA SVGSVDIVNQ VEDPDVLLNP TTSEKPNKPF VGMVFSSIEE 60 AKFCYEEHGI ATGFSVRRRS SYSTARGPQL TRVLFTCSCE GVHKKKCGLD DERKTRKSVS 120 MKTGCKAMIR IARDRNTGKW FVNKFCDDHN HALVSPTKRL LRSNEYMAVV ARDLGETFTK 180 ENLQSSMVAV DNDFIVKYEQ AVDEIYINER KEDYISLYNK RSVNSEDLLL HHAAKTYTMN 240 IFEKVQFEFN AACRFRAVEV DNDGDDKKFK VQSRASNNEE FVVKINEVTK EGVCGCLLFE 300 FMGIPCRHLF RVFDRLYIDE IPSHFIMKRW TKDVNRTEII GSYGLLMHNR HLGSEEMQII 360 HYYRRSTQLA YMIGKSKEAY IVAMGFLDQA FEKVKLLDDI ALQSENTDKP SSETCNSVTD 420 TVLLDSHVSQ TEGRKRVKKE TDKAVDSSTC SWKSEIEKSE GRKKPRICIF CSGYGHDSHN 480 CILKSKNTGI NINGAGSPFR KFASVQEAPG LVLQFSSQPN TTTGAWSSSI EIFSKEETQP 540 TGLG

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MVVEWEQCNY MGLVFLIEMA SVGSVDIVNQ VEDPDVLLNP TTSEKPNKPF VGMVFSSIEE  60
AKFCYEEHGI ATGFSVRRRS SYSTARGPQL TRVLFTCSCE GVHKKKCGLD DERKTRKSVS  120
MKTGCKAMIR IARDRNTGKW FVNKFCDDHN HALVSPTKRL LRSNEYMAVV ARDLGETFTK  180
ENLQSSMVAV DNDFIVKYEQ AVDEIYINER KEDYISLYNK RSVNSEDLLL HHAAKTYTMN  240
IFEKVQFEFN AACRFRAVEV DNDGDDKKFK VQSRASNNEE FVVKINEVTK EGVCGCLLFE  300
FMGIPCRHLF RVFDRLYIDE IPSHFIMKRW TKDVNRTEII GSYGLLMHNR HLGSEEMQII  360
HYYRRSTQLA YMIGKSKEAY IVAMGFLDQA FEKVKLLDDI ALQSENTDKP SSETCNSVTD  420
TVLLDSHVSQ TEGRKRVKKE TDKAVDSSTC SWKSEIEKSE GRKKPRICIF CSGYGHDSHN  480
CILKSKNTGI NINGAGSPFR KFASVQEAPG LVLQFSSQPN TTTGAWSSSI EIFSKEETQP  540
TGLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-20	FAR1 family protein