PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA07509.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 551aa    MW: 59879.4 Da    PI: 7.3904
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA07509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.53e-10164188226
                 -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                 +++ C +++ t tC++Gd+CkF H+
  OVA07509.1 164 GEKDCAHYMLTRTCRFGDSCKFDHP 188
                 7889********************8 PP

2zf-CCCH32.61.4e-10216241227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 ++  C++f++t  Ck+G +CkF+H++
  OVA07509.1 216 GEDDCPYFLKTKKCKFGIKCKFNHPK 241
                 7789********************96 PP

3zf-CCCH413.2e-13264288327
                 S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                 +++C+f+++tG Ck+G++CkF+H++
  OVA07509.1 264 EPPCSFYMKTGKCKFGASCKFHHPK 288
                 79*********************96 PP

4zf-CCCH34.34.1e-11345368326
                 S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                 ++ C+f+++tG CkyG++C+++H+
  OVA07509.1 345 EVHCPFYLKTGSCKYGATCRYNHP 368
                 566********************9 PP

5zf-CCCH40.83.6e-13430453326
                 S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                 + +C+f+++tG Ck+G+rCkF+H+
  OVA07509.1 430 QIECDFYMKTGDCKFGERCKFHHP 453
                 568********************8 PP

6zf-CCCH37.44.4e-12486509427
                 ---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                 + C+f+++tGtCky  +C+F H+p
  OVA07509.1 486 VVCPFYMKTGTCKYSVNCRFDHPP 509
                 67********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    
MANQIYGYNP SSYGAGTSYY SSRTVIDPYH PDSSFISSSA LLDSSSNYPS MYMNHHDGFG  60
AGAGYSSARI SAEMAGVTGG VPTSSSTPTM THSLSQSLWP PGVDVGAASF GPLHAGAKRS  120
ADALYHQTYP GTNNTFGQSE ALYSTKHPRL ESTSHLPIYP QRPGEKDCAH YMLTRTCRFG  180
DSCKFDHPSW VPEGGIPDWK EVQLVPTIES LPERPGEDDC PYFLKTKKCK FGIKCKFNHP  240
KDKINSTDAP DTVDVSLLPE RPSEPPCSFY MKTGKCKFGA SCKFHHPKDI QIPVTGQENG  300
NIEQTDSVVA VDGKTIGDAM LVKPYAPFTP ALLHNSKGLP VRPGEVHCPF YLKTGSCKYG  360
ATCRYNHPDR FAINPPVAAA LGHAIITSPA TNLNIGFINP AASILPTIDP RLAQATLGLG  420
QTVYPQRPGQ IECDFYMKTG DCKFGERCKF HHPIDRSAPT QSVNKLTLQQ NIKLTLAGLP  480
RREGAVVCPF YMKTGTCKYS VNCRFDHPPP GEAVAMATVV QGETNSASAP GDVEDNNKED  540
HTIIQEQQQQ S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.11e-173C3H family protein