PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07309.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 397aa MW: 44812.5 Da PI: 6.64

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	311	333	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ OVA07309.1 311 FMCRKCGKAFAVRGDWRTHEKNC 333 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MTDPYSNFFT GWFNFNPLLQ HCSSSSSNPS PPYPYNLYAN NNNNNNNNNI SSNNTNYPYN 60 NMHHYQLSPP HSPPLREALP LLSLSPTRHH EEEPSCSAME EEEEEMEDNN NKKKKSRENI 120 DETSCFFSAN TTTSMSMSDA ETVTVALHIG LPCSPSTADL ISRVSSSSST SSYTNNTEQQ 180 QQQQQEEGGG VTVAAITAGG YPTTSRLNKG QYWIPTPSQI LIGPTQFSCP VCCKTFNRYN 240 NMQMHMWGHG SQYRKGPESL RGTQPTAMLR LPCYCCAPGC RNNIDHPRSK PLKDFRTLQT 300 HYKRKHGIKP FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGH 360 GHAAYGIDDV CFEEEDQAED DEPALSEIEQ DDDQSSQ

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MTDPYSNFFT GWFNFNPLLQ HCSSSSSNPS PPYPYNLYAN NNNNNNNNNI SSNNTNYPYN  60
NMHHYQLSPP HSPPLREALP LLSLSPTRHH EEEPSCSAME EEEEEMEDNN NKKKKSRENI  120
DETSCFFSAN TTTSMSMSDA ETVTVALHIG LPCSPSTADL ISRVSSSSST SSYTNNTEQQ  180
QQQQQEEGGG VTVAAITAGG YPTTSRLNKG QYWIPTPSQI LIGPTQFSCP VCCKTFNRYN  240
NMQMHMWGHG SQYRKGPESL RGTQPTAMLR LPCYCCAPGC RNNIDHPRSK PLKDFRTLQT  300
HYKRKHGIKP FMCRKCGKAF AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGH  360
GHAAYGIDDV CFEEEDQAED DEPALSEIEQ DDDQSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-120	C2H2 family protein