PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07092.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

RAV

Protein Properties

Length: 344aa MW: 39312.5 Da PI: 6.3593

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.4	2.8e-11	11	54	1	50
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaar 50 s+ykGV + +grW A+I++ + r++lg+f+t e Aa +++a+ OVA07092.1 11 SKYKGVVPQP-NGRWGAQIYE------NhHRVWLGTFDTQEAAALTYDRAA 54 89**9888.8**999......44********999999999998 PP
2	B3	103	1.6e-32	124	226	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f+k ltpsdv+k++rlv+pk++ae++ +g+ ++ l++edesg+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v F++ +r + ++l OVA07092.1 124 FEKPLTPSDVGKLNRLVIPKQYAEKYfplsgdSGD--KGLLLSFEDESGKFWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVSFER-RRfDVQRL 219 99*************************965444..6779********************************************6.55699999 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ OVA07092.1 220 FIRWRRR 226 99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MYPTPKTPSA SKYKGVVPQP NGRWGAQIYE NHHRVWLGTF DTQEAAALTY DRAAAMSRGS 60 DATLNFQLYT DLNINYQEYV EQQQQNREQL QEDDEEEEEE TISSTEVVGG DLEREREEER 120 ENMFEKPLTP SDVGKLNRLV IPKQYAEKYF PLSGDSGDKG LLLSFEDESG KFWRFRYSYW 180 NSSQSYVLTK GWSRFVKEKR LDAGDVVSFE RRRFDVQRLF IRWRRRASAM PVQNSGGGQT 240 VISPTTAAAW TRMFYSAHPY PSHHVHGPLL YQPDHCLHAG FAVEQQVAEK PSTNKPGNSK 300 RLRLFGVNLD CQLDEPDGSS LSSQDRTQVL YPQGGGHSSN HKVG

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MYPTPKTPSA SKYKGVVPQP NGRWGAQIYE NHHRVWLGTF DTQEAAALTY DRAAAMSRGS  60
DATLNFQLYT DLNINYQEYV EQQQQNREQL QEDDEEEEEE TISSTEVVGG DLEREREEER  120
ENMFEKPLTP SDVGKLNRLV IPKQYAEKYF PLSGDSGDKG LLLSFEDESG KFWRFRYSYW  180
NSSQSYVLTK GWSRFVKEKR LDAGDVVSFE RRRFDVQRLF IRWRRRASAM PVQNSGGGQT  240
VISPTTAAAW TRMFYSAHPY PSHHVHGPLL YQPDHCLHAG FAVEQQVAEK PSTNKPGNSK  300
RLRLFGVNLD CQLDEPDGSS LSSQDRTQVL YPQGGGHSSN HKVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	4e-64	RAV family protein