PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA06956.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 339aa MW: 37995.4 Da PI: 7.6989 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.8e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl OVA06956.1 14 KGPWSPEEDSKLKEYIEKFGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.6 | 2.5e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ ++++ G++ W+ Ia+ ++ gRt++++k++w++ OVA06956.1 69 GEFSDDEDRIICNLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 339 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KFGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC NLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKIMGV 120 VNSSSHEQRK PSNSNLFQSP LQTPPSIFNG NSNFYYTQTR SFMGLLADHH ESINPKSSSL 180 LNNTVSTTTT NTSLLQAQDQ GLMGPMHHYQ VKDNFLMFGS GDQPSCSSSD GSCNQISYGN 240 KEIHEYEYDT TGTRSVGSST NCEMIMENYF YNGAHEDQNQ KFMFGAAGSC VNGPNGWIST 300 DQKPNVLSWE DNQLGFGLEE VKQLVSNNNN ACNNIIFKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-76 | MYB family protein |