PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06867.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 343aa MW: 39454.6 Da PI: 4.9879

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103.2	2.1e-32	109	198	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqr+wseeDei++L+G++++ +++g d+++fy +k+ ++++v+k+ql +KirrLK K+ k+ + k+gke++f k+hd k +elskkiW OVA06867.1 109 FQRVWSEEDEIIILKGMVKY-NDKG----LDVNEFYTSIKNLLHVEVTKEQLNDKIRRLKGKYIKNALNEKEGKEMNFPKPHDAKLYELSKKIWS 198 9*****************.7888....69*************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAKTAAKEIE EVEEMEDEVV EDVEDEVEEE QEDEAEEVEE EEEEEKSATK EEEDESSKPK 60 KPKSTVTPAK RPTTMKTAIE DTNRKSEKRR KKNNDSVEEE SKKKKPIPFQ RVWSEEDEII 120 ILKGMVKYND KGLDVNEFYT SIKNLLHVEV TKEQLNDKIR RLKGKYIKNA LNEKEGKEMN 180 FPKPHDAKLY ELSKKIWSPI KSLEAKNGAT VDSVTKVAKK NSRKAKGVVV LEDSAIAKQN 240 VPHLQSESVV EKEEERNVNH FSLMNEFMKS GKGKDLIRPP SSWGREFLGL GLVGSSKKAK 300 EELDQKWRKL QIAETKLYLD RLELLWEDTK MVLDALLESS STS

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAKTAAKEIE EVEEMEDEVV EDVEDEVEEE QEDEAEEVEE EEEEEKSATK EEEDESSKPK  60
KPKSTVTPAK RPTTMKTAIE DTNRKSEKRR KKNNDSVEEE SKKKKPIPFQ RVWSEEDEII  120
ILKGMVKYND KGLDVNEFYT SIKNLLHVEV TKEQLNDKIR RLKGKYIKNA LNEKEGKEMN  180
FPKPHDAKLY ELSKKIWSPI KSLEAKNGAT VDSVTKVAKK NSRKAKGVVV LEDSAIAKQN  240
VPHLQSESVV EKEEERNVNH FSLMNEFMKS GKGKDLIRPP SSWGREFLGL GLVGSSKKAK  300
EELDQKWRKL QIAETKLYLD RLELLWEDTK MVLDALLESS STS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	105	KRRKKNNDSVEEESKKKK
2	89	106	KRRKKNNDSVEEESKKKK
3	90	107	KRRKKNNDSVEEESKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	4e-22	GeBP family protein