PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06866.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 343aa MW: 39550.5 Da PI: 4.9924

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	103	2.5e-32	109	198	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqr+wseeDei++L+G++++ +++g d+++fy +k+ ++++v+k+ql +KirrLK K+ k+ + k+gke++f k+hd k +elskkiW OVA06866.1 109 FQRVWSEEDEIIILKGMVKY-NEKG----LDVNEFYTSIKNLLHVEVTKEQLNDKIRRLKGKYIKNAFNEKEGKEMNFPKPHDAKLYELSKKIWS 198 9*****************.7778....69*************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAKTAAKEIE EVDEMEDEVE EEVEDEVEEE QEDEAEEVEE EEEEEEKSAT KEDDESSKPK 60 KPKSTVTPAK RPTTMKTAID DTNRKSEKRR KKNNDSVEEE SKKKKPIPFQ RVWSEEDEII 120 ILKGMVKYNE KGLDVNEFYT SIKNLLHVEV TKEQLNDKIR RLKGKYIKNA FNEKEGKEMN 180 FPKPHDAKLY ELSKKIWSPI KRLEAKNGAT VDSVTKVAKK SSRNVKGVVV LEDSAIAKQN 240 VPHLQSESVV EKEEERNGNH FSLMNELMRS GKGKDLIRPP PSWGREFNGL RLIGSSKKAK 300 EELDQKWRKL QIAETKLYLD RLELLSEDTK MVLDALLESS SNS

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAKTAAKEIE EVDEMEDEVE EEVEDEVEEE QEDEAEEVEE EEEEEEKSAT KEDDESSKPK  60
KPKSTVTPAK RPTTMKTAID DTNRKSEKRR KKNNDSVEEE SKKKKPIPFQ RVWSEEDEII  120
ILKGMVKYNE KGLDVNEFYT SIKNLLHVEV TKEQLNDKIR RLKGKYIKNA FNEKEGKEMN  180
FPKPHDAKLY ELSKKIWSPI KRLEAKNGAT VDSVTKVAKK SSRNVKGVVV LEDSAIAKQN  240
VPHLQSESVV EKEEERNGNH FSLMNELMRS GKGKDLIRPP PSWGREFNGL RLIGSSKKAK  300
EELDQKWRKL QIAETKLYLD RLELLSEDTK MVLDALLESS SNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	105	KRRKKNNDSVEEESKKKK
2	89	106	KRRKKNNDSVEEESKKKK
3	90	107	KRRKKNNDSVEEESKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	9e-22	GeBP family protein