PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA06714.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 146aa MW: 16985 Da PI: 8.389 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.8 | 1.1e-41 | 65 | 140 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cq+e+C++dl++a++yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerr k++ OVA06714.1 65 CQAEKCNSDLTDARSYHRRHKVCEFHSKAPVVIVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRLKPR 140 ************************************************************************9976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 146 aa Download sequence |
METRIHNSRL KEKGNLKQNS KKELEEVEEE EEDDEEEELG LGFGEDDKKR KGVIKKGSGV 60 SSPFCQAEKC NSDLTDARSY HRRHKVCEFH SKAPVVIVAG LRQRFCQQCS RFHELSEFDE 120 TKRSCRRRLA GHNERRLKPR RDGPSV |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 135 | 142 | RRLKPRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G33810.1 | 3e-40 | SBP family protein |