PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA06642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | SBP | ||||||||
Protein Properties | Length: 111aa MW: 12954.9 Da PI: 11.5606 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 51.5 | 2.6e-16 | 9 | 39 | 48 | 78 |
SEEETTT--SS--S-STTTT-------S--- CS SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh+l efD++krsCrrrLa+hnerrrk+q+ OVA06642.1 9 RFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 39 9***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MSSRVALHRF HQLPEFDQGK RSCRRRLAGH NERRRKPQPG SLLASRYGRL SSSLQGEVVF 60 VQIGVTAWAW QIEPEAFNLS MSRVQTCLRY RTTSALVQVD DLTKLRWTFM Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 2e-20 | SBP family protein |