PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA06641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 137aa MW: 13973.9 Da PI: 10.2017 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 76.5 | 4.1e-24 | 82 | 129 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +CqvegC++dls ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsr OVA06641.1 82 RCQVEGCKVDLSGAKAYYSRHKVCAMHSKSPKVIVAGLEQRFCQQCSR 129 6**********************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 137 aa Download sequence |
MDIGSSSLGV SKGGASGSSD SSLNGLKFGK KIYFEDVGIG VSAKSGGGSS SISVPEGIPV 60 SSPAPATARK GRGVVQGGQP PRCQVEGCKV DLSGAKAYYS RHKVCAMHSK SPKVIVAGLE 120 QRFCQQCSRS VAKSFSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G57920.1 | 8e-24 | SBP family protein |