PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05786.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YC
Protein Properties Length: 260aa    MW: 28845.6 Da    PI: 6.0762
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC177.51.3e-55791821101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv
  OVA05786.1  79 QLQTFWANQfqeIEQTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 177
                 89******99999************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr++l
  OVA05786.1 178 PREDL 182
                 **987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDQQGHGQAP VMGVAGSAGQ MPYGAAQFQS NQMIGAPPVG SIQSPGQTAG FSASQAQLAQ  60
HQLAYQQIHQ QQQQQLHQQL QTFWANQFQE IEQTTDFKNH SLPLARIKKI MKADEDVRMI  120
AAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE  180
DLKDEVLASI PRAGGVTVGG PAEALPYFYM PPQHSPQVGT AGMMMGKPVV DQALYGQQPH  240
PYMAQQMWPQ PPQQQQQADS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152158RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.35e-81NF-YC family protein