PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05733.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 921aa MW: 104856 Da PI: 7.0764

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05733.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52	2.4e-16	165	251	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y +Y+ + GF+v++++++ ++g + +t+ Cs++ k++++ k+ + +++ +t+t+C ak++ ++ dg++++++++leHnH+l+p OVA05733.1 165 QYYTNYGLREGFRVTRRSQRCD-DDGIMRYYTLACSRSRKSQSTAKN---SLKSNLTTKTQCPAKIRSVLQCDGNFKLSTVVLEHNHALCP 251 69***********9988776.9999**********999988...999**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 921 aa Download sequence
MVYDPTYPRD MRPYGMICAH SGLSSFVGDV ASHPIKSDGG GPFFTRGLAL IAGRHERYFD 60 SEMEDESIQN TSNVVDTSSV VDKCDEDEAN KHTSLVGDKC EDNKGKKHTS SVADKCDDNE 120 ADKCNSSVAD KSDDNEANKR SLDESKINEE PKVGMVFSSQ EEVHQYYTNY GLREGFRVTR 180 RSQRCDDDGI MRYYTLACSR SRKSQSTAKN SLKSNLTTKT QCPAKIRSVL QCDGNFKLST 240 VVLEHNHALC PGDTHHLRCN KKDCPKRRLE LNDQVGISAI KSSNFVVEVG GHESLTFGEK 300 KYQNYIDQAR RLRLGDGDVE AIRKYFVRMQ SKNSSFFYVM DLDEECRVRN LFWADARSRA 360 TYEAFGDVVT FDTTYLTNKY AMPFASFVGV NHHGQSVLLG CALLSNEDIG TFVWLFESWL 420 ACMSGIPPKA IITDQCQAIQ KAVDMVFPYA QHRWCLWHIM KKIPEKLKGC SQYEAIKISL 480 QNAVYESFTK DEFEDEWRNM IDKYRLHDNE WLKGLYDERH HWVPIYMKET FWAGMSTTQR 540 NESMNALFDG YVNSKTTLKQ FLEQYDDALR SKVEKENQAD YQSFNSRYEC ITYYDIEKQF 600 QGAYTNTKFK EFQEELKGKL YCYSSLVKEE DSICVYEVTE HVKIGASEKD VVFIVYFNEV 660 ECEVKCMCHL FEFRGIICRH ALSVLTQRKV QNVPSKYVLS RWRKDLKRKY TFVKAIYDDL 720 GVNPSSQRYH EMCKDFYEVA TLATDFEEKY NIVKNGIREL KAKVLGDESI CGSNQTTQVV 780 LIASPNGANE KIKNSRAINM VQNVKDNNAK KPRRKKGSKQ VVVPPAANQS QMINATGTQD 840 SMNLMANTIC FSGSSYVVAP PASNQLHMVN EIGTQESANL SCVSGGNYVF FPPTSTWQGG 900 PTQIWRGGHD AGNISSTGNL N

Sequence ? help Back to Top

Protein Sequence Length: 921 aa Download sequence

MVYDPTYPRD MRPYGMICAH SGLSSFVGDV ASHPIKSDGG GPFFTRGLAL IAGRHERYFD  60
SEMEDESIQN TSNVVDTSSV VDKCDEDEAN KHTSLVGDKC EDNKGKKHTS SVADKCDDNE  120
ADKCNSSVAD KSDDNEANKR SLDESKINEE PKVGMVFSSQ EEVHQYYTNY GLREGFRVTR  180
RSQRCDDDGI MRYYTLACSR SRKSQSTAKN SLKSNLTTKT QCPAKIRSVL QCDGNFKLST  240
VVLEHNHALC PGDTHHLRCN KKDCPKRRLE LNDQVGISAI KSSNFVVEVG GHESLTFGEK  300
KYQNYIDQAR RLRLGDGDVE AIRKYFVRMQ SKNSSFFYVM DLDEECRVRN LFWADARSRA  360
TYEAFGDVVT FDTTYLTNKY AMPFASFVGV NHHGQSVLLG CALLSNEDIG TFVWLFESWL  420
ACMSGIPPKA IITDQCQAIQ KAVDMVFPYA QHRWCLWHIM KKIPEKLKGC SQYEAIKISL  480
QNAVYESFTK DEFEDEWRNM IDKYRLHDNE WLKGLYDERH HWVPIYMKET FWAGMSTTQR  540
NESMNALFDG YVNSKTTLKQ FLEQYDDALR SKVEKENQAD YQSFNSRYEC ITYYDIEKQF  600
QGAYTNTKFK EFQEELKGKL YCYSSLVKEE DSICVYEVTE HVKIGASEKD VVFIVYFNEV  660
ECEVKCMCHL FEFRGIICRH ALSVLTQRKV QNVPSKYVLS RWRKDLKRKY TFVKAIYDDL  720
GVNPSSQRYH EMCKDFYEVA TLATDFEEKY NIVKNGIREL KAKVLGDESI CGSNQTTQVV  780
LIASPNGANE KIKNSRAINM VQNVKDNNAK KPRRKKGSKQ VVVPPAANQS QMINATGTQD  840
SMNLMANTIC FSGSSYVVAP PASNQLHMVN EIGTQESANL SCVSGGNYVF FPPTSTWQGG  900
PTQIWRGGHD AGNISSTGNL N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-125	FAR1 family protein