PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA05633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | NF-YC | ||||||||
Protein Properties | Length: 235aa MW: 26710.1 Da PI: 6.0772 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 181 | 1.1e-56 | 65 | 169 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv OVA05633.1 65 QLQVFWSNQiqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 163 89******98889************************************************************************************** PP NF-YC 97 prdelk 102 prdelk OVA05633.1 164 PRDELK 169 ***975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDQSGQQQSM VEAVTSSAPQ QTAPMVASGS PATQPTPSFP AAQQQLAYQQ VQHFHHQQQQ 60 QQQQQLQVFW SNQIQEIEQT TDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVVFAKACEM 120 FILELTLRSW IHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPRDELKE EGLGIPRAAD 180 SVPYYYVPPQ HPPQVGHPGM LYAAHQPRPP VAYMPWPQPP QQQQTQQQQP QQTDA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 144 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 1e-70 | NF-YC family protein |