PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05506.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YC

Protein Properties

Length: 264aa MW: 29247.1 Da PI: 6.0753

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.3	7.2e-56	86	189	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv OVA05506.1 86 QLQTFWANQfqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 184 89****99999********************************************************************************** PP NF-YC 97 prdel 101 pr++l OVA05506.1 185 PREDL 189 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MDQQGHGQPP VMGVVGSGAQ MPYGANPYQA NQMVGATQPG SVPPSGGSIQ SPGQTTGFAA 60 SPSQLAQHQL AYQHIHMQQQ QQLQQQLQTF WANQFQEIEQ TTDFKNHSLP LARIKKIMKA 120 DEDVRMISAE APVIFARACE MFILELTLRS WNHTEENKRR TLQKNDIAAA ITRTDIFDFL 180 VDIVPREDLK DEVLASMPRG GPMPVGGPAD ALPYYYMPPQ HAPQVGAPGM IMGKPVDQAL 240 YAQQPHPYMW PQPPQQQQQP PTDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	165	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	4e-83	NF-YC family protein