PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05030.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 306aa    MW: 34057.7 Da    PI: 6.5968
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.11.5e-05128147120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C+ C+k+F+r  n++ H+
  OVA05030.1 128 FSCTVCNKTFNRYNNMQMHM 147
                 89*****************9 PP
2zf-C2H213.20.00027213235123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 + C +Cgk F  + + ++H +++
  OVA05030.1 213 FGCRKCGKAFAVRGDWRTHEKNC 235
                 56*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MLINNLCNEN NCIDDEEDEE LSILLTLCPP GQHISKTHQS HPSSDKAVKS STCGNNITNT  60
TTTTTTTTTT TTTTTTTDEE SVTVALHIGL PNAEAASTSN ISSNNGPPLE GHYWIPSPAQ  120
ILVGPTQFSC TVCNKTFNRY NNMQMHMWGH GSQYRKGPES LKGTKPVSPM LSLPCYCCAQ  180
GCKNNIEHPR SKPLKDFRTL QTHYKRKHGA KPFGCRKCGK AFAVRGDWRT HEKNCGKLWF  240
CICGSDFKHK RSLKDHIRAF GGNHAAHGGD DQFLCQEDQE EEEEDDENDD QELQAGNNEG  300
HGYLYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.11e-110C2H2 family protein