PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04904.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 414aa MW: 45156.1 Da PI: 9.2176

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	179	201	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L++H+ H OVA04904.1 179 ACSECGEVFPKIESLEHHQAIrH 201 6******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MAFSTFLPTP DHHHKKTTPK RIKRNKQQKQ PSSWDQIKSL LTCKQIEGSQ VHDPSSKTNN 60 VVGYSKLGSS CSSICNFRDV VHGNTRVVHR ADNSPENSSV GQETGSLLTR KSVNIGSSTR 120 SSSSSIRPSS HNNGVGGGGS YSNSSSRGMQ LRKLSGCYEC HMIVDPSRYP ITPRTTICAC 180 SECGEVFPKI ESLEHHQAIR HAVSELGPED SGRNIVEIIF KSSWLKKDSP ICKIERILKV 240 HNTQRTIQRF EDCRDAVKVR ATNNTRKNPR CAADGNELLR FHCTSLTCAL GARGSSNLCG 300 SVPGCGVCTI IRHGFPGKAH DCKGVRTTAT SGRAHDCFGS TDGSSRRAML VCRVIAGRVK 360 RIADDAPTEE ESVLTGTYDS VAGYEGLFAN LEDLTVFNPR AILPCFVVIY KSVV

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MAFSTFLPTP DHHHKKTTPK RIKRNKQQKQ PSSWDQIKSL LTCKQIEGSQ VHDPSSKTNN  60
VVGYSKLGSS CSSICNFRDV VHGNTRVVHR ADNSPENSSV GQETGSLLTR KSVNIGSSTR  120
SSSSSIRPSS HNNGVGGGGS YSNSSSRGMQ LRKLSGCYEC HMIVDPSRYP ITPRTTICAC  180
SECGEVFPKI ESLEHHQAIR HAVSELGPED SGRNIVEIIF KSSWLKKDSP ICKIERILKV  240
HNTQRTIQRF EDCRDAVKVR ATNNTRKNPR CAADGNELLR FHCTSLTCAL GARGSSNLCG  300
SVPGCGVCTI IRHGFPGKAH DCKGVRTTAT SGRAHDCFGS TDGSSRRAML VCRVIAGRVK  360
RIADDAPTEE ESVLTGTYDS VAGYEGLFAN LEDLTVFNPR AILPCFVVIY KSVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-173	C2H2 family protein