PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04665.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 308aa MW: 34605.6 Da PI: 7.62

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	141	195	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k OVA04665.1 141 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 195 788899***********************************************98 PP
2	HD-ZIP_I/II	127.8	4.5e-41	141	230	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlsk+q+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l OVA04665.1 141 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 230 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MMVEKEDLGL SLSLNSNTSS NTENRHHLQL NLMPSSVSSP SVPSPFFLQK SSWNEAFGSS 60 DRNSEIYRGE TRSFLRGIDV NRMPSTVDCE DEAGVSSPNS TVSSISGKRS SHERDINGEE 120 NEMERACSRG ISDEEDGDTS RKKLRLSKDQ SAILEESFKE HNTLNPKQKL ALAKQLNLRP 180 RQVEVWFQNR RARTKLKQTE VDCEFLKRCC ENLTEENRRL QKEVQELRAL KLSPQFYMHM 240 TPPTTLTMCP SCERVAVSSS NNAAAVGSTA PAQSTAADAS HHHPMVAHQH HRALPINPWA 300 STPIHHRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	146	SRKKLRL
2	190	198	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	7e-95	HD-ZIP family protein