PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04641.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 289aa    MW: 31115.1 Da    PI: 4.7484
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00072263285223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C+ C+k+F++   +++H +  H
  OVA04641.1 263 SCKACPKTFTSETAMQSHSKAkH 285
                 7*****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEFWGVEVKP GQNLKVSPGE EKVLHLSQAS LGEVKKDKGN DSILLHVKID GQKLVVGTLS  60
ADNCTHISYD LVFEKEFELS HSWKNGSIYF CDSDSDLGED YPLDLVENGK PEDVKAKPTT  120
NKVNAAKTDS SSAKKVKLVD PKKGKKPEDD DDEDDKDADS EEDESDDEAM LDAEDDSDDE  180
DEDGESSDED EATPKKVQQG KKRPAESATK ADKKAKLVTP QKSGADGKKG GGHTATPYPK  240
GGKTPASGDK SKQQTPKSAG QISCKACPKT FTSETAMQSH SKAKHSGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.21e-30C2H2 family protein