PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA04580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 249aa MW: 28296 Da PI: 7.0648 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 86.9 | 2.9e-27 | 81 | 162 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA++vGF +r+s+ +sk +g i++r++vC+keg+++ + k+ + a+tr gCka++++k++k gkw ++k+e+eHnH+l OVA04580.1 81 FYDAYARRVGFVTRVSAYCRSKIDGAIISRRLVCNKEGFKKGKVKR------PMAVTREGCKAMINIKRQKPGKWIISKFEKEHNHPL 162 9***************************************998766......**********************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVYADSIEDP EMLENTIVGD LRDGQMIENS VISGVPTRVG DDGGELTENS NEMGLISSYA 60 DVDLEPHEGM EFESEEAAKA FYDAYARRVG FVTRVSAYCR SKIDGAIISR RLVCNKEGFK 120 KGKVKRPMAV TREGCKAMIN IKRQKPGKWI ISKFEKEHNH PLLISSKIRR GSLQNRSAED 180 AKKIRELSYA LQRANRRCAA YREHLDTILK DIEEHTNHLS DKVQGIVHSV TELESQELEE 240 HSHHRRLQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 3e-65 | FAR1 family protein |