PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04578.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 293aa    MW: 33820.3 Da    PI: 6.8504
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-26123213190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY +Y++++GF++r++++++s+ ++ +++++fvCskeg+r+++ +++ + r   + ++tr gC+a+l+v++++ gkw+vtk++ +H+H+l 
  OVA04578.1 123 EFYVSYGRRTGFTIRIHHNRRSRITNAVISQDFVCSKEGFRAKKYENR-RDRVlpPPPVTREGCHAMLRVTLKEGGKWVVTKFVRDHSHKLL 213
                 6******************************************99992.222245899********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MVGVAVVMVK LWWPRGSKGD GDYIMIPVLF LWLHYPFTST WMCVMENSIG QGQGIDLDES  60
DGGLQDATYD EHETEDELSR DLDSCTGGND RTVEGSVEKL STYVDASEPN IGMEFKSKDD  120
AREFYVSYGR RTGFTIRIHH NRRSRITNAV ISQDFVCSKE GFRAKKYENR RDRVLPPPPV  180
TREGCHAMLR VTLKEGGKWV VTKFVRDHSH KLLSPGKVPW RRSDKILVGE DEKDKKIREL  240
SNELDSERRR CKRQCAVYQE QLQMVLKDIE HHSDHLSRTV QNIVMSIKEI EDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.19e-43FAR1 family protein