PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA04577.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | FAR1 | ||||||||
Protein Properties | Length: 188aa MW: 21648.2 Da PI: 7.0625 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.1 | 2e-25 | 77 | 167 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y++++GFs+r+++ ++s++n+ +++++f Cske +r++++++ ++ r + ++tr C+a+l+v++++ kw+vtk++++H+H+l OVA04577.1 77 EFYVSYGRRTGFSIRTHHIRRSQKNNAVISQDFICSKERFRAKKSEN-KRDRVlpPPPVTRERCNAMLRVTLKDGVKWVVTKFVKDHSHNLL 167 6******************************************9999.3333245899*******************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MESSVVRGFD LDKSDGGLQD EMTDEHETED KLSRDLDSYT GENDRIVEGS IEKLPTDGET 60 SEPYLGMDFK SRDDAREFYV SYGRRTGFSI RTHHIRRSQK NNAVISQDFI CSKERFRAKK 120 SENKRDRVLP PPPVTRERCN AMLRVTLKDG VKWVVTKFVK DHSHNLLNPS NVPWRRSDKI 180 LVGEVGES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-24 | FAR1 family protein |