PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04541.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 503aa MW: 53017.8 Da PI: 8.4918

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OVA04541.1 66 FVCEICNKGFQRDQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	14.9	7.8e-05	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ OVA04541.1 142 WKCDKCSKKYAVQSDWKAHLKTC 164 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MPVDLENSSA MSVSTASGEA SASSSGNQTA PVSTTTKKKR NLPGMPDPNA EVIALSPKTL 60 MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTSK EIRKRVYVCP EPSCVHHDPS 120 RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTREYR CDCGTLFSRR 180 DSFITHRAFC DALAEESAKA QTVPNSKSEE VQKLQVVVSP SSPPPPPPPP LPPPSTTDVL 240 PDPNQNSELP EKSTGVLQHI PPSTCVNGSS SSPSNVSSSN GMFTSIFASS TMAGTMQPQT 300 SAFSDLICAM TRSERPTNLE LASATEPTSL CLSSNSGSTL FAPLGQDRHQ YAPSPHPTMS 360 ATALLQKAAQ MGAAATNASL LRGFGISVSS SSGERENMQW SHTIDNEPGP AAPGLGIGLP 420 CDGAAGLTEL MMGPSSLFGP RPTTLDLLGL GIGAGGASKG GLSALITSIG GGGGGFDVAA 480 AAAATYGGGN LLGKTWERDE KNQ

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MPVDLENSSA MSVSTASGEA SASSSGNQTA PVSTTTKKKR NLPGMPDPNA EVIALSPKTL  60
MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLRQRTSK EIRKRVYVCP EPSCVHHDPS  120
RALGDLTGIK KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTREYR CDCGTLFSRR  180
DSFITHRAFC DALAEESAKA QTVPNSKSEE VQKLQVVVSP SSPPPPPPPP LPPPSTTDVL  240
PDPNQNSELP EKSTGVLQHI PPSTCVNGSS SSPSNVSSSN GMFTSIFASS TMAGTMQPQT  300
SAFSDLICAM TRSERPTNLE LASATEPTSL CLSSNSGSTL FAPLGQDRHQ YAPSPHPTMS  360
ATALLQKAAQ MGAAATNASL LRGFGISVSS SSGERENMQW SHTIDNEPGP AAPGLGIGLP  420
CDGAAGLTEL MMGPSSLFGP RPTTLDLLGL GIGAGGASKG GLSALITSIG GGGGGFDVAA  480
AAAATYGGGN LLGKTWERDE KNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-127	C2H2 family protein