PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04023.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family AP2
Protein Properties Length: 428aa    MW: 46960.6 Da    PI: 8.4086
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.82.8e-1372128155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n+ ++k+   g ++ +e Aa+a++ a++k++g
  OVA04023.1  72 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 128
                 57*******************6666777775555599******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MASSSSEPGS GLKAEGGSGG EASEAAAAII MANSSDQMLL YRGLKKSKKE RGCTAKERIS  60
KMPPCAAGKR SSIYRGVTRH RWTGRYEAHL WDKSTWNQNQ NKKGKQGAYD DEEAAARAYD  120
LAALKYWGPG TLINFPVSDY SRDLEEMQNV SREEYLASLR RKSSGFSRGI SKYRGLSRYD  180
LYIKDLSVII PEGENYIPPF FKILFLGNCE GGTTESEYPG GFCIERKVDL TSYIKWWGLN  240
KICRTNSLSK SLDETKHGGS EDIGGGELKT LEWGLQPTEP YQMPRLGLAH GHGGKKKHQA  300
VSSALSILSR SAAYKSLQEK ASKEKNNEKN NNENTNKEVQ FGEAIPVEST SGDGGGNEGH  360
LMGGVTTLGM SWLPFQRTTS LSPLTTPFLS APLLTNYNTI DPLADPILWT SLVSHPETGL  420
SLTSTEEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-107AP2 family protein