PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03574.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 367aa MW: 42565.5 Da PI: 7.3326

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	201	220	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ OVA03574.1 201 FSCSVCNKTFNRYNNMQMHM 220 89*****************9 PP
2	zf-C2H2	15.9	3.6e-05	285	307	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +CgksF + + ++H +++ OVA03574.1 285 FMCRKCGKSFAVRGDWRTHEKNC 307 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MMSFLQLPLF YQHQHQHQQQ QQQQQEEEEE EKDQLLDHHQ QNSTKCLLPL LSRFKESSTT 60 SKPLKEEEES TTTTTTTIRR QLLKDDDVQF VGVKDEKYYL ENNNVTVALH IGLPKIGGDY 120 FGHGDHVQIM NKQSLKYDDY DDDDDEEEEE EDKKSMNKKI SFEGINCGLI SSSNSSSTDH 180 QSSSRFWIPT PAQILIGPTR FSCSVCNKTF NRYNNMQMHM WGHGSQYRKG PESLRGVQPT 240 AMLRLPCYCC AHGCKNNINH PRAKPLKDFR TLQTHYKRKH GVKPFMCRKC GKSFAVRGDW 300 RTHEKNCGKL WYCTCGSDFK HKRSLKDHIR SFGKGHFPHP CHKDFEDHEK EFVTGSDEDE 360 LGSAGSH

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MMSFLQLPLF YQHQHQHQQQ QQQQQEEEEE EKDQLLDHHQ QNSTKCLLPL LSRFKESSTT  60
SKPLKEEEES TTTTTTTIRR QLLKDDDVQF VGVKDEKYYL ENNNVTVALH IGLPKIGGDY  120
FGHGDHVQIM NKQSLKYDDY DDDDDEEEEE EDKKSMNKKI SFEGINCGLI SSSNSSSTDH  180
QSSSRFWIPT PAQILIGPTR FSCSVCNKTF NRYNNMQMHM WGHGSQYRKG PESLRGVQPT  240
AMLRLPCYCC AHGCKNNINH PRAKPLKDFR TLQTHYKRKH GVKPFMCRKC GKSFAVRGDW  300
RTHEKNCGKL WYCTCGSDFK HKRSLKDHIR SFGKGHFPHP CHKDFEDHEK EFVTGSDEDE  360
LGSAGSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-103	C2H2 family protein