PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA03238.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 704aa    MW: 77994.6 Da    PI: 5.8994
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA03238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.43.3e-202176156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++++ q++eLe+ F+++++p++++r +L++ lgL+ rq+k+WFqNrR+++k
  OVA03238.1 21 KKRYHRHSPRQIQELETIFKECPHPDEKQRLQLSRDLGLEPRQIKFWFQNRRTQMK 76
                688899***********************************************999 PP
2START173.41.4e-542154391206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 e+a  a++el+++ +++ep+W ks     e++n +++ + f++ ++      ++ea+r+sgvv+m+   lv  +ld++ +W e ++    +a t+e +s
  OVA03238.1 215 EIAGNAMDELIRLLQSGEPLWIKSTtdgrEILNIETYERLFPRPNNlknpdVRVEASRDSGVVIMNGLALVDMFLDSG-KWIELFPtivtDARTIEILS 312
                 57889********************999999999999999999888999*99**************************.99999999999********* PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                 +g      g lqlm+  +q+l+plvp R+f+f+Ry++q ++g w+i+dvS d  ++++  s+s+ R  ++pSg+li++++ng++kvtwvehv+ ++++ 
  OVA03238.1 313 PGisenrsGSLQLMYEVMQVLTPLVPtREFYFLRYCQQIEQGLWAIADVSFDFSRENQFvSPSLTR--KRPSGCLIQDMPNGYCKVTWVEHVEIEEKTT 409
                 *********************************************************999******..*****************************99 PP

                 .HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 178 .hwllrslvksglaegaktwvatlqrqcek 206
                  h l+r l++s++a+ga +w+ tlqr ce+
  OVA03238.1 410 tHRLYRDLINSCVAFGAERWLTTLQRMCER 439
                 9***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MEAGGGSGGE EQDISDPQRK KKRYHRHSPR QIQELETIFK ECPHPDEKQR LQLSRDLGLE  60
PRQIKFWFQN RRTQMKTQHE RADNMALRSE NDKIRCENIA IREALKHVIC PSCGGPPVED  120
SYFDEQKLRM ENARLKEELD RVSSLAAKYI GRPISRLPSI QPLTSSLDLS VGSFGNQTTG  180
PTLDLDLLPG SSSSVPTLPI QAMGISDMDK SLMLEIAGNA MDELIRLLQS GEPLWIKSTT  240
DGREILNIET YERLFPRPNN LKNPDVRVEA SRDSGVVIMN GLALVDMFLD SGKWIELFPT  300
IVTDARTIEI LSPGISENRS GSLQLMYEVM QVLTPLVPTR EFYFLRYCQQ IEQGLWAIAD  360
VSFDFSRENQ FVSPSLTRKR PSGCLIQDMP NGYCKVTWVE HVEIEEKTTT HRLYRDLINS  420
CVAFGAERWL TTLQRMCERF ACLMVTGTSP RDLGGVIPST DGRRSMMKLA QRMINIFCAS  480
ISASNSGQRW TTLSGMNDVG VRVTVHKSTD PGQPNGVVLS ATTSIWLPVS SQNVFNFFKD  540
ERTRPQWDVL AEGNSVQEVA HIANGSDPGN SISVLRSINA SQNNMLILQE SCTDSSGSLV  600
VYAPVDLQSI NVAMSGEDPS YIPLLPSGFT ICPDGRPDQG GASTSSNLQG SMTRSGGSLV  660
TVAFQILVSS LPSAKLNLES VTTINNLIST TVHQIKTALN CPGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein