PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03236.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 719aa MW: 77300.4 Da PI: 6.5343

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03236.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.1	8.1e-12	298	358	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g k + ++ ++ +e+Aa+a++ a++k++g OVA03236.1 298 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtrKGrQGIHMCGYDKEEKAARAYDLAALKYWG 358 57*****************6666644785338***********************98 PP
2	AP2	46.3	1.1e-14	401	452	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OVA03236.1 401 SIYRGVTRHHQHGRWQARIGRVAG---NKDMYLGTFSTQEEAAEAYDIAAIKFRG 452 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MASMTNWLGF SLSPQELPTQ TQSHHQQSVS RHGFNSDEVS GTDDVSGDCF DLGSDSTAPS 60 LTGPYGILEA LNRTHQQHDW SDNNFKTSSE LSMLIGGSSS NHHLNHEEPK LEDFLGGHSF 120 SDHDQQKLHG CNGMTGAYDN TGDYMFSNCS LQLPAATVAT SNGGGGGGGG GVSSGGSVNN 180 NNSSIGLSMI KTWLRNQPAP PQQENKNDGV NSGGGGGVVG TNGQTLSLSM STGSQSSCPL 240 PLVAATAGPV VTAGGGGGGA ESSSSENNKQ KSNTTDSPNG AVEAVPRKSI DTFGQRTSIY 300 RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQGIHMCGYD KEEKAARAYD LAALKYWGST 360 TTTNFPISNY EKELEDMKLM TRQEYVASLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG 420 RVAGNKDMYL GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVNSIM ESNTLPIGGA 480 AKRLKEAEQI ETSVDGRRTD DDNITSQLTD GINNYGAHHG WPAIHAFQQA QPLNMPYPYN 540 QQRGWCKQEQ ETVAAHSFQD LHQLQLGNTH HNFFQPSVLH NLMSLDSSSL EHSSGSNSVI 600 YCSGGGGSGS GGSNGSFQGV MGGSNGGYVM PMGMVMSTDQ SNHNHGGSFG ENDVKQQMGY 660 ESILSSTDPY QGRNTYYMAQ QSPPACNNWM PTGVQALAPR SNNLAVCHGA PTFTVWNDA

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MASMTNWLGF SLSPQELPTQ TQSHHQQSVS RHGFNSDEVS GTDDVSGDCF DLGSDSTAPS  60
LTGPYGILEA LNRTHQQHDW SDNNFKTSSE LSMLIGGSSS NHHLNHEEPK LEDFLGGHSF  120
SDHDQQKLHG CNGMTGAYDN TGDYMFSNCS LQLPAATVAT SNGGGGGGGG GVSSGGSVNN  180
NNSSIGLSMI KTWLRNQPAP PQQENKNDGV NSGGGGGVVG TNGQTLSLSM STGSQSSCPL  240
PLVAATAGPV VTAGGGGGGA ESSSSENNKQ KSNTTDSPNG AVEAVPRKSI DTFGQRTSIY  300
RGVTRHRWTG RYEAHLWDNS CRREGQTRKG RQGIHMCGYD KEEKAARAYD LAALKYWGST  360
TTTNFPISNY EKELEDMKLM TRQEYVASLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG  420
RVAGNKDMYL GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD MSRYDVNSIM ESNTLPIGGA  480
AKRLKEAEQI ETSVDGRRTD DDNITSQLTD GINNYGAHHG WPAIHAFQQA QPLNMPYPYN  540
QQRGWCKQEQ ETVAAHSFQD LHQLQLGNTH HNFFQPSVLH NLMSLDSSSL EHSSGSNSVI  600
YCSGGGGSGS GGSNGSFQGV MGGSNGGYVM PMGMVMSTDQ SNHNHGGSFG ENDVKQQMGY  660
ESILSSTDPY QGRNTYYMAQ QSPPACNNWM PTGVQALAPR SNNLAVCHGA PTFTVWNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-124	AP2 family protein