PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03099.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 346aa MW: 39141.9 Da PI: 6.5164

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.9	0.00033	220	242	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H OVA03099.1 220 YQCESCKKVFKSYQALGGHRANH 242 9***********99999998887 PP
2	zf-C2H2	12.9	0.00034	271	293	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C + F++k L H r H OVA03099.1 271 HKCPICFRIFRSKQALGGHKRIH 293 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MEKRECKLCF KRFSNGRALG GHMKSHMAIL QTPPKIEQTR QQIGNETEST SSSSSDENEE 60 EEEEEVKTGL YYGLRENPKK SFRLVDPVFS STMDVGSIVL DRESETESFK NPTRRRSKRN 120 RISKHQNQNH QNEEPELKKL KSIKPIKVES PVESEPVSSV SDNTPEEDVA LCLMMLSRDT 180 WMKEEEEEVA EKSVEKMDDD DDDDSEEIIK FCPSRIRKKY QCESCKKVFK SYQALGGHRA 240 NHKKINGCIP SSTSKAETQN GSNAGGDRRI HKCPICFRIF RSKQALGGHK RIHISDLATA 300 TTTTTSNSAK FKDNLIDLNL PAPIEDGHIS QVEISVVSGT EFVDLI

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MEKRECKLCF KRFSNGRALG GHMKSHMAIL QTPPKIEQTR QQIGNETEST SSSSSDENEE  60
EEEEEVKTGL YYGLRENPKK SFRLVDPVFS STMDVGSIVL DRESETESFK NPTRRRSKRN  120
RISKHQNQNH QNEEPELKKL KSIKPIKVES PVESEPVSSV SDNTPEEDVA LCLMMLSRDT  180
WMKEEEEEVA EKSVEKMDDD DDDDSEEIIK FCPSRIRKKY QCESCKKVFK SYQALGGHRA  240
NHKKINGCIP SSTSKAETQN GSNAGGDRRI HKCPICFRIF RSKQALGGHK RIHISDLATA  300
TTTTTSNSAK FKDNLIDLNL PAPIEDGHIS QVEISVVSGT EFVDLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-45	C2H2 family protein