PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02775.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 274aa    MW: 30464.3 Da    PI: 8.414
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-057597123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++CgksF ++  L  H  +H
  OVA02775.1 75 YRCGICGKSFGSHQALGGHRASH 97
                9*************999999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MTNEEKPFFI INWSLTGKRG REPTKRETST LTIPSPSSSS SSDDQDQQTA YFLLMLSASP  60
TTTTTTTTTK HQDEYRCGIC GKSFGSHQAL GGHRASHFKI MKTRLALVQQ KPQPYIIDIG  120
VPEGATTKEE TLMDDQVLFN DIADDGVNKK KKKTKFHECS ICRKRFSCGQ ALGGHKRLHW  180
EKNINIKPCS DHSSGTSAPA ENNDDVADSI SKKNRIKKKK KKSRLISSLC FDLNLPPPSS  240
SDKDEDEDEL GERFSFLTTE GSSPASTLMP CCYC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149165KKKKKTKFHECSICRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-16C2H2 family protein