PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02464.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C3H
Protein Properties Length: 440aa    MW: 48169.5 Da    PI: 7.5673
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.52.2e-08123142525
                 --SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                 +C++++  G C+yGd+CkF H
  OVA02464.1 123 ICNYWLV-GKCSYGDNCKFQH 142
                 7******.************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    
MDVDNGNKRL YNRLGGAPSV DKSQQVCYHW RAGRCNRHPC LYRHSELPQA AGNGMALKRS  60
QMIPSDDGNF SGSQSFSRRK PNSTNPRGDI QLSSKWGRGQ GGAVGGGPGG GGFRAPQKRL  120
DKICNYWLVG KCSYGDNCKF QHQWFVSECF TMLTQLAGHE KVISGIAFPM GSDKLYSGSK  180
DNSVRVWDCQ TGQCSAVINL GAEIGCMISE GPWVFVGIPN FVKAWNTQTN TELSLDGFSG  240
QVYSLTVGNE MLLAGTQDGS ILVWRFTAAT NGFEPAASLK GHTSAVVSLV VGANRLYSGS  300
MDNTIRVWEL ETLQCIQTLT EHTSVVMSVL CWDLFLLSCS LDHTIKVWVA TESGKLEVTY  360
THQEEQGVLS LCGMHDAQGK PVLICSCNDN TVRVYDLPSF NERGKIFAKE EIRAIQIGPG  420
GLFFTGDGTG ELKVWKWSEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein