PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA02457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 198aa MW: 22367.1 Da PI: 8.7127 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.9 | 7.5e-05 | 35 | 57 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H OVA02457.1 35 YTCSFCKREFRSAQALGGHMNVH 57 9********************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 198 aa Download sequence |
MERTINDKTK DSWDYNKSYY GRDLLGKFSW PPRPYTCSFC KREFRSAQAL GGHMNVHRRD 60 RARLRQSPPW DNPNPNSNFH SSSTSSANHG QLPPFTYTFP SLPTPSTTCL PSSSPTAEEK 120 IISSKVSNPL DPSSSKGGEN LKKTTVMKTF FEVGELKGFI QENDQCKNLK KGEIVRLDLE 180 IGLCPNDDLD LELRLGYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23130.1 | 4e-29 | C2H2 family protein |