PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA02425.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 24755.7 Da PI: 5.0856 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 82 | 131 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ +++g OVA02425.1 82 YRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAAFSMRG 131 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 216 aa Download sequence |
MDSSFFSSEF FEFSPQSSTG SLEPFPWDGL LFDQQSLPFN ENDTEEMLLY SVLTEAPISH 60 QIKEEEVSSE EKKEDKTKEK AYRGVRRRPW GKFAAEIRDS TRNGVRVWLG TFDSAEAAAL 120 AYDQAAFSMR GSMAVLNFSV ERVRDSLKEM KYRCEDGCSP VVALKKRHSM RKKFTSRKSK 180 VREVRRIDNL VELEDLGSEY LDELLSSYQS TSSSSC |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 72 | 89 | KKEDKTKEKAYRGVRRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 7e-61 | ERF family protein |